Shewanella benthica: SHEWBE_3172
Help
Entry
SHEWBE_3172 CDS
T06707
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, thiamin-requiring
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sbk
Shewanella benthica
Pathway
sbk00020
Citrate cycle (TCA cycle)
sbk00785
Lipoic acid metabolism
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
sbk01210
2-Oxocarboxylic acid metabolism
Module
sbk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHEWBE_3172 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SHEWBE_3172 (sucA)
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SHEWBE_3172 (sucA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
SQH77135
UniProt:
A0A330M594
LinkDB
All DBs
Position
SHEWBE:complement(3036544..3039366)
Genome browser
AA seq
940 aa
AA seq
DB search
MHQGIMKAWLESSHLNGANSTYVEEMYEAYQEDPQSVSQDWQVVFDNLSHANGASADVPE
AAHSKVRDYFRSLALEGRHKGSARVTDPEVDAKQVKVLQMINAHRFRGHQNANLDPLGLW
KRDKVAELAPAFHGLTSEDMQREFNTGSFAHGGETMKLVDLVHALKATYCGSIGAEYMHM
IDTDEKRWIQQRLEPSLGRANYDKIAKIRILQGLNAAEGMEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEVVVGMAHRGRLNLLVNILGKKPAELFDEFAGKHSDALNGS
GDVKYHQGFSSDFKTPAGNVHLALAFNPSHLEIVNPVVMGSVRARLDRRGCDDGLEVLPI
TIHGDTAITGQGIVQETFNMSQTRGFKVGGSIRIVINNQVGFTTSNQEDIRSTEYCTDIA
KMVQAPIFHVNADDPEAVVFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPL
MYAKIKKHPTPRKIYADKLIAENTLAADEVTAMINAYRDALDHGDCVVDEWRPMTLHSVD
WSPYINREWDEDYPAQMSMERIRNLANKISYVPESHKLQSRVAKIYKDRALMAKGEKLLD
WGFAETLAYASILEDKKRIRITGQDSGRGTFFHRHAVLHNQNDASTYMPLRNISADQGPI
DLTDSVLSEASVLAFEYGYATAEPGGLILWEAQFGDFANCAQVVIDQFLSSGEQKWGRLC
GLTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRP
LIVMSPKSLLRHPLAVSTMEELAQGTFQNVIPEMDSLDSNKVDRVVFCSGKIYFELLERR
RKDNITHVALIRVEQLYPFPRAEMEETLAQYQHVKDFVWCQEEPQNQGAWYCSQHHFWGA
IPAGAQLTYAGREASAAPACGYPALHAQQQDSLIKTALKL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcctggctcgaatcatcacacctaaacggtgctaattcg
acctatgtagaagagatgtatgaagcctatcaagaagaccctcagtctgtttcccaagac
tggcaagtggtgtttgataacctctctcatgcgaacggcgcatcggctgatgtacccgaa
gcagcccactctaaagtacgtgattattttcgtagtttagcgctcgaaggacgtcataag
ggctccgcccgtgtgacagatcctgaagtcgacgctaagcaagttaaagtcctgcagatg
atcaacgctcatcgattccgtggccaccagaacgctaatctcgaccctctgggactgtgg
aaacgtgacaaggtcgctgaactggcccccgcctttcatggcttaacaagcgaagatatg
cagcgtgaattcaatacaggctcatttgctcatggtggcgaaaccatgaagcttgtggat
cttgtacacgcattgaaggccacatattgtggctctatcggtgccgaatacatgcacatg
atagatactgacgagaagcgctggatccagcaaaggttagaaccttctttaggtagagct
aattacgataaaatcgctaaaatccgtatcctccaaggcttgaacgccgccgaaggtatg
gaaaaatacttaggcgctaaattcccaggggcgaaacgtttctctcttgaaggtggcgat
gcgcttgttcctatgatgcgcgagataatctatcgtgcgggcgaagccggcaccaaagag
gtcgtcgtgggcatggctcaccgtggtcgtctgaacctattggttaatatcttaggtaag
aaacccgctgagttgtttgacgaattcgccggtaaacatagcgacgcactcaatggctcg
ggtgatgttaagtatcaccaaggtttctcctccgattttaagacgcccgctggcaatgtt
cacctggccctcgcgtttaacccatcacatctggagatcgttaatccggtcgtcatgggc
tcggtgcgcgcacgtctggatcgtcgtggctgtgatgatggcctcgaagtcttgcctatc
accattcatggtgacacggctatcacgggtcagggcatagtccaggagacattcaacatg
tctcagactcgcggtttcaaggtcggtggcagcatacgtatcgtgattaataatcaggta
ggtttcaccacctcgaatcaggaagatatacgctcaactgagtattgtaccgatatcgct
aagatggtgcaggcaccgattttccacgtgaatgccgacgaccctgaggccgtggtcttc
atctctcagctggccgtcgattatcgtaacgaatttaagcgagatgtggttatcgatctg
gtttgttatcgccgccatggccataacgaagccgatgagcccagtgcgactcaaccgctg
atgtatgccaagattaagaagcacccgacgccgcgtaagatctatgccgataagttgatt
gcagagaataccttggccgccgatgaagtcaccgcgatgatcaatgcctatcgtgatgcc
ttagatcacggtgattgtgtggttgatgaatggcgtcctatgacgctgcattcggtcgat
tggtcaccctacatcaacagagagtgggatgaagactatccggctcagatgtcgatggag
cgtattcgcaatcttgcgaataagatcagttacgtgcctgaatctcacaagttgcaatct
cgcgtggctaagatctacaaagatcgcgccttgatggcaaaaggtgagaagctgctcgat
tggggcttcgccgagactctggcttatgcgtcgatcctcgaagacaagaaacgtattcgt
atcacgggtcaggactcgggtcgtggcaccttcttccatcgccatgcggtattgcataat
caaaatgatgcttcgacttatatgccgctacgtaacatatccgctgatcaaggcccgatt
gacctgactgattcagtgttatcagaagcctctgtattggctttcgaatacggttatgcc
acggccgagccgggtggattgatcctatgggaagctcagtttggtgatttcgccaactgt
gcccaagtcgtcatcgatcagttcctctcgtcgggtgagcagaagtggggccgcttgtgt
ggtctgaccatgttgctacctcacggctatgaaggacaagggcctgagcattcgagtgct
cgtctggagcgtttcctgcaattatgtgccaaccacaatatgcaggtctgcgtgccatcg
actccggctcaggtttatcacatgctcagacgtcaggtggtacgccctatgcgtcgtcct
ctgatcgtgatgtctcccaaatctttgctgcgtcatccattagctgtttctactatggaa
gagctcgcacagggaacgttccagaacgttatccctgagatggatagcttggatagcaat
aaggtggatcgcgtggtcttctgtagcggtaagatctatttcgaactgctagagagacgt
cgtaaagacaatatcactcatgtcgcgcttatccgtgtggagcaactttatccgttccct
cgcgctgagatggaagagacattagcccaataccagcatgtcaaagattttgtctggtgt
caggaagagccgcaaaaccagggcgcttggtactgtagtcagcatcatttctggggggca
atcccagcgggtgctcaattaacctatgccggtcgtgaagcatcagctgcacctgcctgt
ggttatccggcgctgcatgctcagcagcaagactctttgatcaaaacagcattaaaactg
tag
DBGET
integrated database retrieval system
