Shewanella baltica OS185: Shew185_4250
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Entry
Shew185_4250 CDS
T00571
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
sbm
Shewanella baltica OS185
Pathway
sbm01501
beta-Lactam resistance
sbm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shew185_4250
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew185_4250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbm02000
]
Shew185_4250
01504 Antimicrobial resistance genes [BR:
sbm01504
]
Shew185_4250
Transporters [BR:
sbm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shew185_4250
Antimicrobial resistance genes [BR:
sbm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shew185_4250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABS10366
LinkDB
All DBs
Position
complement(5064063..5067197)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGILSIRSLPVSQYPNIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMTGIDHLRYISSTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSLDVIAAIRSQNAQVSAGQLGGAPSVAGQELNATVSAQSRL
QTAEEFRKIILKSDISGANVFLGDVARVELGSESYAVVSLYNGQPATGLAIKLATGANAL
DTASAVREKIAEMKPFFPQGLEVVYPYDTTPFVEQSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSMAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPVKKGHGHIETGFFGWFNRTFDKLTNRYESSVAGIIKRSFRV
MTIYVVLVIAVGWIFIRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVLEKVSDHFMAE
EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVKSIAGRAMGVFGQMKDALV
FAFVPPAVIELGTANGFDMYLQDKNGQGHEKLVAARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHVDHAKLSALGIEITNVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPG
DLDTWYVRNNKGDMVPFSAFATGTWEYGSPRLERFNGLPSMNIQGATAPGFSTGAAMEIM
EDLAKQLPPGFGVEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVVLV
VPLGIIGALVAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGSGLVEATL
HAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTAVLGGMMSSTFLGIFFVPLF
FVIVERIFSKREKKGKEEKPNSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgccttgattattatg
ctggcggggatcctctcgatccgctcgctgccagtgtctcaatatcctaacattgcacca
ccgaccgtggtgatcagtgctaactatcctggcgcttccgctaagattgttgaagattct
gtgactcaggtgattgagcaacgtatgacgggtatcgatcacctccgttatatctcctca
accagtgacagttttggtaatgcgtctattaccttaaccttcaacgccgaagccgatccg
gatattgcacaggttcaagttcagaacaagttacagggcgctatgaccctgttaccacaa
gaagtgcagtcgcaaggggttaacgttaacaagtcgagttcaggcttcttaatggtatta
ggcttcgtatcgaccgacggttcgttagataaaggcgatatcgccgactatgttggtgcg
aacattcaagatcctatgagccgtgttcctggtgtaggtgagattcagttgttcggtgcc
caatatgcgatgcgtatatggctagatccgttgaagttgactcaatataatttaactagc
ttagatgttattgcggcgattcgttctcaaaacgctcaagtctccgctggacagttaggt
ggcgcgccatctgtggctggccaagagctgaacgcgactgtatcggcgcaaagtcgttta
caaacggcggaagagtttcgcaagattatccttaaatcggatatttcaggtgcaaatgtc
ttcctcggtgatgtggcgcgagttgagttaggttctgaaagttatgccgtggtgtcattg
tataatggtcaacctgcaacagggttagcgattaagctggcaacgggtgctaacgcgctg
gataccgcatcagcggttcgtgaaaaaattgctgaaatgaagcctttcttcccgcagggg
ttagaagtggtttatccatacgatacaacgcctttcgttgagcaatctatcgaaggtgtg
gtgcataccttgcttgaagcgatcgtacttgtattcgttatcatgtacctcttcctgcag
aacttccgtgcaaccttgatcccgactattgcagtgcctgtggtattgctgggtaccttt
gcgattctatcgatggcgggtttctcgattaacaccctaaccatgttcgctatggtgctc
gccatcggtttgctggtggacgatgcgattgtggtggtggaaaacgtcgagcgggtgatg
tccgaagagggcttaagtccactcgaagcgacgcgtaagtcgatggaccaaattactggt
gccttagtcggtattggtctgaccctatctgctgtgtttgtacctatggcatttatgtct
ggttcaacgggtgtgatctaccgtcagttctctatcactattgtctctgcgatggcgctg
tctgtactggtggcgttgattttaacgccagcactgtgtgcgactatgctcaagcctgtc
aagaagggccatggtcacatagaaacaggcttcttcggttggtttaaccgtactttcgac
aagctgactaaccgttatgaatcgagcgtggctggtatcatcaagcgcagcttcagagtc
atgacgatttacgttgtgctggttattgcagtgggttggatcttcatccgtatgcctacc
gccttcttgccagacgaagaccaaggtattttgtttacccaagctattttgccgactaac
tcaactcaagaaagcaccctaaaagtattggagaaagtctctgatcactttatggctgaa
gaaggcgtgagatcggtatttagcgtggcgggcttcagttttgctggtcaagggcaaaac
atgggtatcgctttcgttggcttgaaggattggtctgagcgtgaagcgccaggcatggat
gttaagtctattgcgggtcgcgccatgggtgtgttcggccagatgaaagatgctttagtc
ttcgccttcgtaccgcctgcggttatcgagttgggtacggcgaacggtttcgacatgtac
ttgcaggataagaacggccaaggtcacgagaagttagtggcggcacgtaaccaactgctg
ggcatggcggcacagaatccaaatctggtgggtgtgcgtcctaacggccaagaagatgcg
ccgatttatcaattacatgtagatcacgctaagttaagcgcgttaggcattgaaatcact
aatgtgaacagtgtgcttgccacggcttggggtggttcttatgtgaacgactttattgac
cgcggccgcgtgaagaaagtgtatgtgcaaggtgatgcccagtatcgtatgcaaccagga
gatttagacacttggtatgtgcgtaacaacaagggcgacatggtgccattctcagccttt
gcgacgggtacatgggaatacggttctccacgtctagagcgctttaacggcttaccgtcg
atgaacattcagggtgctacggctcctgggttcagtaccggcgcggcgatggaaatcatg
gaagaccttgctaagcagcttcctcctggctttggtgtcgagtggaacggcttatcgtac
gaagagcgtctatcgggtaaccaagcgcctgcgctgtatgccctgtcgatcttagtggtg
ttcctcgtactggcggcactctatgagagctggtcggtgccgtttgctgttgtgctggtg
gtgccactcgggatcatcggtgccttagttgccatgaacggtcgcggcttgccaaacgac
gtgttcttccaagtggggctgttaaccacagtgggcttagcaaccaagaatgccatcttg
attgtggaattcgcgaaagagttctacgagaaaggttcaggcttagtcgaggcgaccttg
catgctgtacgtgtgcgtttgcgtcctattctgatgacgtctcttgcctttggtttaggt
gttgtgccattagccattagctcgggtgtgggttctggtagccaaaacgccatcggtact
gcggtacttggcggtatgatgagctcgactttcctaggtatcttcttcgtaccattattc
ttcgtgatagtggagcgtatcttcagtaagcgtgagaagaaaggtaaagaagagaagcca
aactcagctgagtaa
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