Shigella boydii Sb227 (serotype 4): SBO_1501
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Entry
SBO_1501 CDS
T00301
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBO_1501 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbo03400
]
SBO_1501 (nth)
Enzymes [BR:
sbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SBO_1501 (nth)
DNA repair and recombination proteins [BR:
sbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBO_1501 (nth)
Prokaryotic type
SBO_1501 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
ABB66118
ShiBASE_China:
SBO1501
UniProt:
Q320Z0
LinkDB
All DBs
Position
complement(1478655..1479290)
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggcgaatacg
cctgcagcgatgcttgaactgggcgttgaaggggttaaaacctatatcaaaacgattggg
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatcttactggagcagcat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcccggcgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaacgttgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctgcacgggcgttatacctgcattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctga
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