Shigella boydii Sb227 (serotype 4): SBO_3153
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Entry
SBO_3153 CDS
T00301
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00020
Citrate cycle (TCA cycle)
sbo00270
Cysteine and methionine metabolism
sbo00566
Sulfoquinovose metabolism
sbo00620
Pyruvate metabolism
sbo00630
Glyoxylate and dicarboxylate metabolism
sbo00680
Methane metabolism
sbo00710
Carbon fixation by Calvin cycle
sbo00720
Other carbon fixation pathways
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
sbo01200
Carbon metabolism
Module
sbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sbo_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SBO_3153 (mdh)
00620 Pyruvate metabolism
SBO_3153 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SBO_3153 (mdh)
00566 Sulfoquinovose metabolism
SBO_3153 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SBO_3153 (mdh)
00720 Other carbon fixation pathways
SBO_3153 (mdh)
00680 Methane metabolism
SBO_3153 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SBO_3153 (mdh)
Enzymes [BR:
sbo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
SBO_3153 (mdh)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
ABB67654
ShiBASE_China:
SBO3153
UniProt:
Q31WA4
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All DBs
Position
3158208..3159146
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AA seq
312 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV
TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLK
KDIALGEEFVNK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagtcctcggcgctgctggcggtattggccaggcgcttgcactactgtta
aaaacccaactgccttcaggttcagaactctctctgtatgatatcgctccagtgactccc
ggtgtggctgtcgatctgagccatatccctactgctgtgaaaatcaaaggtttttctggt
gaagatgcgactccggcgctggaaggcgcagatgtcgttcttatctctgcaggtgtagcg
cgtaaaccgggtatggatcgttccgacctgtttaacgttaacgccggcatcgtgaaaaac
ctggtacagcaagttgcgaaaacctgcccgaaagcgtgcattggtattatcactaacccg
gttaacaccacagttgcaattgctgctgaagtgctgaaaaaagccggtgtttatgacaaa
aacaaactgttcggcgttaccacgctggatatcattcgttccaacacctttgttgcggaa
ctgaaaggcaaacagccaggcgaagttgaagtgccggttattggcggtcactctggtgtt
accattctgccgctgctgtcacaggttcctggcgttagttttaccgagcaggaagtggct
gatctgaccaaacgtatccagaacgcgggtactgaggtggttgaagcgaaagccggtggc
gggtctgcaaccctgtctatgggccaggcagctgcacgttttggtctgtctctggttcgt
gcactgcagggcgaacaaggcgttgtcgaatgtgcctacgttgaaggcgacggtcagtac
gcccgtttcttctctcaaccgctgctgctgggtaaaaacggcgtggaagagcgtaaatct
atcggtaccctgagcgcatttgaacagaacgcgctggaaggtatgctggatacgctcaag
aaagatatcgccctgggcgaagagttcgttaataagtaa
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