Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101029846
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Entry
101029846 CDS
T04350
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04022
cGMP-PKG signaling pathway
sbq04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
101029846 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101029846 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbq04040
]
101029846 (TRPC6)
Ion channels [BR:
sbq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101029846 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
101029846
NCBI-ProteinID:
XP_010333010
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MSQSPEFGPRRGSSPRGTIRAGARRNESQDYLLMDSELGEDGCPHAPLPSYGYYPCFRGS
DNRLAHRRQTVLREKGRRLANRGPAYMFSDRSTSLSVEEERFLDAAEYGNIPVVRKMLEE
CLSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAI
LSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLR
KGARIERPHDYFCKCNDCNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALEL
SNELAVLANIEKEFKNDYKKLSVQCKDFVVGLLDLCRNTEEVEAILNGDVETLQSGDHGR
PNLSRLKLAIKYEVKKICGSMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLL
PNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDF
GMLAIFAASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDP
QIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIG
MFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVY
NVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPK
SLFYLLLKLKKWISELFQSHKKDFQEDAEMNKINEEKKLGVLGSHEDLSKLSLDKKQVGH
NKQPSVRNSEDFHLNSFNNPPRQYQKIMKRLIKRYVLQAQVDKESDEVNEGELKEIKQDI
SSLRYELLEEKSQNTQDLAELIRELGEKLSMEPNQEKTNR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagcccggagttcggtccccggaggggcagttctccccggggcacaatccga
gccggtgcgcggcgcaacgagagccaggactatctgctcatggactcggagctgggagag
gacggctgcccgcacgccccgctgccttcttacggctactacccctgcttccggggatct
gacaacagactggctcaccggcggcagacagttctccgtgagaaagggagaaggttagct
aatcgaggaccagcatacatgtttagtgatcgctcaacaagcctatctgtagaggaggaa
cgctttttagatgcagctgaatatggtaacatcccagtggtgcggaagatgttagaagaa
tgcctctcgctcaatgttaactgtgtggattacatgggccagaatgccctgcagttggca
gtggccaatgagcatctggaaattacagaacttcttctcaagaaagaaaacctctctcgg
gttggggatgctttgcttctagccattagtaaaggttatgttcggattgtggaagcgatt
ctcagtcatccagcttttgctgaaggcaagaggttagcaaccagtcctagccaatcagaa
ctccagcaagatgatttttatgcctatgatgaagatgggacccggttctctcatgatgtg
actccaatcattctggccgcccactgccaggaatatgaaatcgtgcataccctcctgcgg
aagggtgctaggattgaacggcctcatgattatttctgcaagtgcaatgactgcaaccag
aaacagaagcatgactcatttagccactccagatctaggattaatgcctataaaggcctg
gcaagtccagcttacctgtcattgtctagtgaagatccagtcatgacggctttagaactt
agcaatgaactggcagtgctggccaatattgagaaagagttcaagaatgactacaaaaaa
ctatcagtacagtgcaaagactttgttgttggactccttgatctgtgcagaaacacagaa
gaagtcgaggccattctgaatggggatgttgaaacgctccagagtggtgatcatggtcgc
ccaaatctcagccgtttaaaacttgccattaaatacgaagtcaaaaaaatttgtggctca
atggggaagataatgcgtggaccattcatgaagtttgtagcacacgcagcctccttcacc
atttttctgggactgctggtcatgaacgcagctgacagatttgaaggcacaaaactcctt
cctaatgaaaccagcacagataatgcaaaacagctgttcaggatgaaaacatcctgcttc
tcatggatggagatgctcattatatcatgggtaataggcatgatatgggctgaatgtaaa
gaaatttggactcaaggccccaaggaatatttgtttgagttgtggaatatgcttgacttc
ggtatgttagcaatttttgcagcatcattcattgcaagattcatggcattctggcatgct
tccaaagcccagagcatcatcgatgcaaatgataccttgaaggacttgacaaaagtaaca
ctgggagacaatgtgaaatactacaatttggccaggataaagtgggacccctctgatcct
caaataatatctgaaggtctttatgcaattgctgtagttttaagtttctctaggatagct
tatattttaccagcaaatgaaagctttggacctctgcagatctcacttggaagaacagtc
aaagacatcttcaagtttatggtcatattcattatggtgtttgtggcctttatgattgga
atgttcaacctctactcctactacattggtgcaaaacaaaatgaagccttcacaacggtt
gaagagagttttaagacactgttctgggctatatttggactttctgaagtgaaatcagtg
gtcatcaactataaccacaaattcattgaaaacattggttatgttctttacggagtttat
aatgttacaatggtcattgttttgctaaatatgttaattgccatgatcaacagttcattc
caggaaattgaggatgacgctgatgtggagtggaaatttgcaagggccaaactctggttt
tcctactttgaggaggggagaacacttcctgttcccttcaatctggtgccaagtccaaag
tccctgttctatctcttactgaagcttaaaaaatggatttctgagctgttccagagtcat
aaaaaagatttccaggaagatgcagagatgaacaagataaatgaagaaaagaaacttgga
gttttaggaagtcatgaagacctttcaaaattatcacttgacaaaaaacaggttgggcac
aataaacaaccaagtgtaaggaactcagaagatttccatttaaatagtttcaataatccg
ccaagacagtatcagaaaataatgaagaggctcattaaaagatacgtactgcaggcccag
gtagataaggagagtgacgaagtgaatgaaggggaactgaaggaaattaagcaggatatc
tcaagtctccgctatgaactccttgaagagaaatctcagaatacacaagacctagcggaa
cttattagagaacttggagagaaattatccatggaaccaaatcaagagaaaaccaataga
taa
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