KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101036976
Entry
101036976         CDS       T04350                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3F
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03250  Viral life cycle - HIV-1
sbq05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101036976
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101036976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbq03019]
    101036976
Messenger RNA biogenesis [BR:sbq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101036976
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1
Other DBs
NCBI-GeneID: 101036976
NCBI-ProteinID: XP_010341887
LinkDB
Position
Unknown
AA seq 653 aa
MEASPASRPRLLMGPHTFTENFTNNPGVFGRHQTYLCYEVKRQGPDGTRDLMTEQRDCLR
NQAKNLSGSDGRHAERCFLDRVPSWQLDLTQTYRVTCFISWSPCFNCAREVAEFLQKNPH
VNLHIFAARIYDCRPGYEEGLQMLQNAGAQVSIMTSEEFRYCWDTFVDHQGHPFQPWEGL
DEHSQALSGRLQAILQVRASSLCPEPHRLPAWESGRHAQGCAGMWEAQSPGPSREWGSVA
ISPEDPGPLCIGRFLFCAFRHPMNAMYPGIFYFHFRNLRKAYGRNETWLCFTVEGIMNGS
TVSRKSGVFRNQVGSDPSCHAEMCFLSWFRHNMLSPNKDYEVTWYASWSPCPECAGQVAE
FLARHRNVRLTIFTARLYYFWNPDFQQGLRRLSQEGASVLIMDYEDFEYCWDNFVYNDGQ
TFKPWKILQXQLSILAHHAAGDSPVKGLPGPPGLAALASCSSCEGLQPILDQLCFCRIIL
SSSCPQAHSTLLPCLIASSWLSWASSAEAPFCLHGYFHPLEPIXPSLVPLTWLFPSPQQN
QILLKSTQVGCGGSCLSSQHLGRSKTFTFQKPSPGQASMQVGALLHPQYPCSLLPVCLQM
FRMFLVHREPLEKSLWAVSLFVDIPFPSLMLQTSHYEVTWYASWSPCPECAAL
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggaggccagcccagcatccaggcccagactcctgatgggtccacatacgttcactgaa
aactttaccaataaccctggggtctttggacggcaccagacctacttgtgctatgaggtg
aagcgccagggtcccgatggcaccagggacctgatgactgagcagagggactgtctacgc
aatcaggctaagaatctcagtggttctgatggccgccatgcagagaggtgcttcctggac
cgggttccttcttggcagctggacctgacccagacctacagggtcacctgcttcatctcc
tggagcccctgcttcaactgtgcccgggaggtggctgaatttcttcaaaagaacccacac
gtgaacctgcacatcttcgctgcccgcatctatgattgtcgcccaggatatgaggagggg
ttgcaaatgctgcagaatgctggggcccaagtctccatcatgacctctgaggagtttagg
tactgctgggacacctttgtggatcaccagggacaccccttccagccctgggagggacta
gatgagcacagccaagccctgagtgggaggctgcaggccattctccaggtgagggcttcc
tccctctgcccagagccccatcgtcttcctgcctgggaaagcggcagacatgctcagggc
tgtgcagggatgtgggaggcccagagcccagggccgtccagggagtggggttcggtggcc
atcagccccgaggacccggggccgctctgcattggcaggtttctcttttgtgccttcaga
cacccgatgaatgctatgtatccaggcatattctacttccactttagaaacctacggaaa
gcctacggtcggaatgaaacctggctgtgcttcacagtggaaggtataatgaatggctca
actgtgtccaggaagagcggcgtcttccgaaaccaggtgggttctgatccctcctgtcat
gcagaaatgtgcttcctctcatggttccgccacaacatgctgtctcctaacaaggactac
gaggtcacctggtacgcctcttggagcccttgcccagagtgtgcagggcaggtggccgag
ttcctggccaggcacaggaacgtgaggctcaccatcttcactgcccgcctctactacttc
tggaatccagatttccagcaggggctccgcaggctgagtcaggaaggggcctccgtgctg
atcatggactatgaagattttgaatattgttgggataactttgtgtacaatgacggtcag
acgttcaagccttggaagatactgcaangacaactctctatccttgcacatcacgctgca
ggagattctccagtgaagggtctccccgggcctcccggtctggctgctctagcctcctgc
tcttcctgcgagggcctccaacccatcctggaccagctttgcttttgccggatcatcctg
agctcctcctgccctcaggcccattccacactgctcccctgcctcatcgcctcctcctgg
ctctcctgggcttcttctgcagaggcccctttctgtctccatggctatttccatccatta
gaacccattnnccccagcctggtgcccctaacctggctcttcccatctccccagcaaaac
caaatcttactaaagtcaacacaggttgggtgcggtggctcatgtctgtcatcccagcat
cttgggaggtcgaaaaccttcaccttccaaaaaccatccccaggacaagcttccatgcag
gtaggggcgctgctgcacccccagtacccatgcagcctcctccctgtctgcctgcagatg
tttcgcatgttcttggtccacagggaaccccttgagaagtccctgtgggcagtgagcctg
tttgtagacatccccttcccctcattgatgttacagacatcacactacgaggtcacctgg
tacgcctcttggagcccttgcccagagtgtgcagccctctga

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