Shewanella baltica OS117: Sbal117_3890
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Entry
Sbal117_3890 CDS
T02013
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sbs
Shewanella baltica OS117
Pathway
sbs01501
beta-Lactam resistance
sbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sbal117_3890
01503 Cationic antimicrobial peptide (CAMP) resistance
Sbal117_3890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbs03036
]
Sbal117_3890
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbs02000
]
Sbal117_3890
01504 Antimicrobial resistance genes [BR:
sbs01504
]
Sbal117_3890
Chromosome and associated proteins [BR:
sbs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sbal117_3890
Transporters [BR:
sbs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sbal117_3890
Antimicrobial resistance genes [BR:
sbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sbal117_3890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
BSH_RND
Beta-barrel_YknX
RND-MFP_C
Biotin_lipoyl
Peptidase_M23
BSH_YknX
BSH_LcnD
HH_CzcB
Beta-barrel_AprE
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
AEH15556
LinkDB
All DBs
Position
complement(4476630..4477862)
Genome browser
AA seq
410 aa
AA seq
DB search
MFTRTLFTQTLFIQRVTERARSACDISLKSPHHLPKAPLFAPLTFLLASLFTLTPIAVSA
ADKVDVIPVTVEAIKETSFADVVNEVGKINAIDSAILNFNASEKISAIHFSNGDKVTKGQ
VIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENVNLADAD
FRQKQATMNDYLIKAPFDGQLTSFSQSIGSQIGAGTALVTLYSLNPVEVRYAISQNDFGK
AQKGQKVNVTVEAYGNKVFKGLVNYVAPAVDESSGRVEVHAALDNPEFKLAPGMFANIKQ
FYSRGIKRLLVPQNSIIANNDERFVWLVRGDSAVKQVVKLAQNTNDGYAVVTEGLAEGDL
VVKTGMQNLKSDSKIKVIQDKNTADKASASSSNSGAGATPSPEPSTEGAE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacgaacgctgtttacacaaacgctgtttatacaaagagtgactgaacgagca
cgcagtgcatgcgatatttcattaaaaagcccccatcatctcccaaaggcgcccttattc
gcgcctttgacgtttctattggcgagtcttttcaccttaacccctatagccgtatctgcg
gcggacaaggtcgacgttatccctgtgacggtcgaggccattaaagaaacctcctttgcc
gatgtcgtcaatgaagtcggtaaaattaacgccattgattcggcgatactcaactttaac
gccagcgaaaaaatcagtgccattcattttagtaacggcgacaaagtgacgaaaggccaa
gtgattgccgagcaagataacactaaggccaaggccgatttagacaaggctaagagcacc
ttagcactggcgaaaactaagcttgagcgtattgaagacctgctgatcaaagagcctttc
gcactcgccaagcaagatgtggatgagctgcgggaaaatgtgaatctggccgatgccgat
tttcgccagaaacaagcgaccatgaacgattacttgatcaaggcgcccttcgacggtcag
ctgacaagctttagccagtccatcggcagccaaattggcgcaggtacagccttagtcact
ctctatagtttaaatcccgtcgaagtccgttatgccatcagccagaacgattttggtaag
gcgcaaaaaggccagaaggtaaatgtaactgtcgaagcttatggcaataaggtgttcaaa
gggttagttaactatgtggctccagcggtggatgaaagctcaggacgagttgaagtgcac
gccgcccttgacaacccagagttcaaactggcgcccggcatgttcgccaatattaagcag
ttctatagccgtgggattaaacgcttattagtgccgcaaaattcgattatcgccaataac
gacgaacgctttgtctggttagtgcggggcgatagcgctgtaaaacaagtggttaaactc
gcgcaaaacaccaacgacggttatgcggtcgtgaccgaaggtttagccgaaggcgatctc
gtggttaagacgggcatgcaaaacctcaagtccgatagcaagatcaaagtcattcaggat
aaaaacacggccgataaagcttcagcctccagttccaactcaggtgcgggtgctactcca
agtcctgaacctagcactgagggggccgaataa
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