Salmonella bongori serovar 48 z41 --: N643_16515 Help Entry N643_16515        CDS       T03249                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism sbv  Salmonella bongori serovar 48:z41:-- Pathway sbv03030   DNA replication sbv03410   Base excision repair sbv03420   Nucleotide excision repair sbv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sbv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     N643_16515    03410 Base excision repair     N643_16515    03420 Nucleotide excision repair     N643_16515    03430 Mismatch repair     N643_16515  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sbv03032]     N643_16515    03400 DNA repair and recombination proteins [BR:sbv03400]     N643_16515 Enzymes [BR:sbv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      N643_16515 DNA replication proteins [BR:sbv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      N643_16515 DNA repair and recombination proteins [BR:sbv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      N643_16515    NER (nucleotide excision repair)     GGR (global genome repair) factors      N643_16515    MMR (mismatch excision repair)     DNA ligase      N643_16515   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       N643_16515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase Nlig-Ia Motif Other DBs NCBI-ProteinID:  AID26334 LinkDB All DBs Position complement(3511024..3512709) Genome browser AA seq 561 aa AA seqDB search MKLWKSMAWGMLLWHAQSGAVCPDWPSARATEEISRLQQQLTDWNDIYWKQGVSAVDDSV YDQLSARLVQWQRCVGDDVSPEQGLPPISGATAHPVAHTGVRKLADRQALAQWMRGRCGL WVQPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTQKIYHIPAIPQTTRGALANAVLQG EIFLQREGHIQQRMGGMNARSKVAGMLMRQDNAPALNSLGIFIWAWPDGPTTMSERLNQL TKAGFSLTQKYSRAVKSADDVEQARQLWLTSALPFVTDGVVIRMAKEPASHHWQPGQGDW LAAWKYPPVAQVAQVSAIQFSVGKSGKIAVVASLVPVMLDDKRVQRVNIGSVKRWQAWDI APGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPGHDFNSLTCFYASAACQEQFISRLVW LGSRSVLGLDGMGEARWRALHQMHRFEHIFSWLALTPAQIASTPGFAKEKSEQIWRQFNL ARRQPFSRWIMAMDIPLTQAALQASGVRSWEQLLTQTKQHWRQLPATGERRVGKIIAWQD NPQINALSRWLATQRIPGFGP NT seq 1686 nt NT seq  +upstreamnt  +downstreamnt atgaaattatggaaaagcatggcgtgggggatgttattgtggcacgcccaaagcggagcg gtttgcccggactggccgtcagcaagagcgactgaagaaatctctcgtttgcagcaacag cttactgactggaatgatatctactggaaacaaggtgttagcgcggttgacgatagtgtg tacgaccagctcagcgcaagactggttcagtggcaacgctgtgttggcgatgatgtttcg ccagaacaaggcttgccgccaataagcggcgcaacagcgcatcctgttgcgcatacgggc gtgcgcaaactcgcggaccgacaggcgctagcgcagtggatgcgtgggcgctgtgggctt tgggttcaaccaaaagtagatggcgtagcggtaacgttggtttatcagaacggtaaacta acgcgagctatcagccggggcaatgggctacaaggcgaagactggacgcaaaaaatttat cacattcctgcaataccgcagacaacacgaggcgcgcttgccaacgcggttttgcaaggg gagatttttctacagcgtgaggggcatatccagcaacgaatggggggcatgaatgctcgc tcgaaagtcgcaggaatgttaatgcgccaggataacgccccggcgcttaattcgttaggt atttttatttgggcgtggccggacggtccgacaaccatgtctgaaagattaaatcagctc actaaggccggattcagcctgacgcagaaatattccagggcggtgaaaagcgccgacgac gtcgaacaggcgcgtcagttatggctgacatcagctctaccttttgttacggatggcgta gtgatacgcatggctaaagaacccgcgtcacatcactggcagcccggacagggcgactgg ctggcagcatggaaatatccgccggtagcacaggttgcgcaagtgagtgctattcagttc tcggtagggaaaagcggtaaaattgctgtggtagcgtcgcttgtccccgttatgctggat gataagcgggttcagcgggtcaatattggttctgtcaaacgttggcaggcatgggatatc gcgccaggcgatcagatcctggtgagtctggccgggcaaggtattccccggcttgatgag gtcgtctggcggagtcgtgagcggagtaagcctgtgcctcctggtcatgatttcaattca ctgacctgcttttatgcttcggcagcgtgtcaggaacagtttatctccaggctggtatgg ctgggctcaagatcagttctggggctggatggcatgggagaagcgcgttggcgggctttg catcagatgcatcgctttgaacatatcttctcctggcttgccctgacgcctgcacaaata gcaagcactcccggttttgctaaggaaaaaagtgaacagatatggcggcaatttaatctg gcgcgccgacaacccttttcccgctggataatggcgatggatatccctttaacgcaggcc gccttgcaggccagcggcgttcgttcatgggaacagttattgacgcaaacaaagcagcac tggcggcagttgcctgcgacaggcgagcgtcgtgtcgggaaaattatcgcctggcaggat aatcctcagattaacgcgctgagcagatggctggctactcagcgtattccagggttcggg ccttag

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