Candidatus Tachikawaea gelatinosa: TGUWTKB_2810
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Entry
TGUWTKB_2810 CDS
T03624
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sbw
Candidatus Tachikawaea gelatinosa
Pathway
sbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TGUWTKB_2810 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbw03400
]
TGUWTKB_2810 (nth)
Enzymes [BR:
sbw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TGUWTKB_2810 (nth)
DNA repair and recombination proteins [BR:
sbw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TGUWTKB_2810 (nth)
Prokaryotic type
TGUWTKB_2810 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_8
RecR_HhH
HHH_5
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
BAP58525
UniProt:
A0A090ART2
LinkDB
All DBs
Position
complement(301851..302483)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKKKCIKIFEKLQNCYNIETMTLEFNSPFELLISVMLSAQTRDINVNKSTKKLYAIANT
PEKMLNIGLDQIKFFIKNLGLFNIKSKNIISICKILIYKYNSVIPNNRQDLESLPGIGRK
TANIILNYVFNFPTIAVDTHVFRIANRTGLAIGNNVNIVEKKLLQIVPKEMKKKCHFLLV
KHGRIRCKAKFFNCSLCIIQNLCEYKEKRL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaaaatgtatcaaaatttttgaaaaattacaaaattgctacaacattgaa
acaatgacactggaatttaattcaccgtttgaactattaatatctgttatgctttctgca
caaactagagatataaatgttaacaaatcaactaaaaaattatatgctatagctaatact
ccagaaaaaatgttaaatattggattagatcaaataaaattttttattaaaaaccttgga
ttatttaatataaaatctaaaaatattatatcaatatgtaaaatactaatatataaatat
aatagtgtaattccaaataatagacaagatctagaaagtttacctggaataggtagaaaa
acagcaaatattattcttaattatgtttttaactttccaactattgctgtagatactcat
gtatttcgcatagctaatagaacaggattagctataggaaataatgtaaacattgtagaa
aaaaaattacttcaaatagtcccaaaagaaatgaaaaaaaaatgtcattttttgctagta
aaacatggacgtataagatgtaaagcaaaattttttaattgcagtttatgtataatacaa
aatttatgtgaatataaagaaaaacgtttataa
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