Shewanella carassii: TUM17387_03690
Help
Entry
TUM17387_03690 CDS
T07543
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
scaa
Shewanella carassii
Pathway
scaa00540
Lipopolysaccharide biosynthesis
scaa01100
Metabolic pathways
Module
scaa_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TUM17387_03690 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scaa01005
]
TUM17387_03690 (lpxC)
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
TUM17387_03690 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
scaa01005
]
Lipid A
TUM17387_03690 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BCV65010
LinkDB
All DBs
Position
405030..405923
Genome browser
AA seq
297 aa
AA seq
DB search
MVKTTGVGLHSGNKVTLTIKPAPVNTGIVLVRTDMQPAVEIAAKAEQVRETTMCTALVND
EGVRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGIKDQSAAKKY
LKIKHTVRVEDGDKWAELRPFKGFRVDFAIDFNHPEIARSQQHMVMDFSSSAFVKDISRA
RTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKILDAFGDLYV
AGHAIVGEFCAYKTGHALNNRLVRALLAQQDAWELVSFEKEADVPVSFMMPSNVVMA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaccaccggtgtcggtttgcactccggcaataaggtgactttgactatcaag
cccgcaccagtcaatacagggatcgtactcgtgcgcaccgatatgcagccggcagtggag
attgctgccaaggcagagcaggtgcgtgaaacgactatgtgtacggctctggtcaatgat
gaaggtgttcgcatctcaacgattgagcatctgttcgcggcactcgcgggcttgggtatc
gacaatgccgttattgaagtggatgctcccgagatccccatcatggacggcagtgccagc
ccctttgtattcctgctgcaaagcgcggggatcaaagatcagtcagcggccaagaaatat
ctgaagatcaagcacacagtgcgtgttgaagacggtgataagtgggctgaattgcgaccc
ttcaaaggtttcagagtcgattttgctattgacttcaatcaccctgaaattgcccgtagt
caacaacatatggtgatggatttttcctcttctgcctttgtgaaagatatcagccgcgcc
agaacctttggttttatgcgtgatatcgagtacctgcgtgccaacaacttggcattaggc
ggcagtatggaaaacgcggttgtgcttgatgaatatcgtgtcctcaaccccgatggcctg
cgttatgaggatgaatttgttaagcacaagattctggatgcgtttggtgacctgtatgtg
gcgggtcacgccatagtcggagaattctgtgcctacaagacggggcatgctcttaacaac
cggttggtgcgggctctgcttgcccagcaggatgcttgggagttggtcagcttcgaaaaa
gaagcggatgtgcctgtcagctttatgatgccatccaatgtggtgatggcttaa
DBGET
integrated database retrieval system
