Shewanella carassii: TUM17387_15520
Help
Entry
TUM17387_15520 CDS
T07543
Name
(GenBank) acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
scaa
Shewanella carassii
Pathway
scaa01501
beta-Lactam resistance
scaa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TUM17387_15520
01503 Cationic antimicrobial peptide (CAMP) resistance
TUM17387_15520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_15520
01504 Antimicrobial resistance genes [BR:
scaa01504
]
TUM17387_15520
Transporters [BR:
scaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TUM17387_15520
Antimicrobial resistance genes [BR:
scaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TUM17387_15520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6170
Motif
Other DBs
NCBI-ProteinID:
BCV66193
LinkDB
All DBs
Position
complement(1721133..1724381)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSIITTSVKRPVTVWMFMLAVILFGMVGFSRLAVKLLPDLSYPTLTIRTLYEGAAPVEVE
QLISKPIEEAVGIVKGLRQISSISRSGMSDVVLEFEWGTEMDMASLDVREKLDTIELPLD
VKKPLLLRFNPNLDPIMRLALPAPKATEAELKRLRTYAEEELKRDLESLSGVAAVRLSGG
LEQEVHILLNQQKLAQLDLSSEAIRNRISEENVNLSAGKVIQGDREYLVRTVNQFHSLDE
LANVIVYQKGNTLVRLGEIAEVTDAFKERSDITRIGGKESIELAIYKEGDANTVAVASKL
KSQLQQMRSEAKDSATPVPEIIYDQSEFIESAVSEVTSSALIGSLLAMLVIYLFLRDIIP
TLIISISIPFSVIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRCKAQGM
DRRQAAITGTKEVAGAIFASTLTTLAVFVPLVFVDGIAGALFADQALTVTFALLASLLVA
LTSIPMLASREGFTMLPELVKRDKPQPPAGKLGKLKHYSATVFTFPFLLLLSYLPRLLLT
LVLIVTRLLVWLVSLVMKPLSRLFNLCYGWLADGYRPLLNLALKFRGITLALAIAVTAIS
GVLMSRLGMELIPPMNQGEFYVEILLPPGSEVSQTDAVLQRLALAIKDREEVKHAYSQAG
SGGLMTSDTRRGGENWGRLQVVLADHRAFDQVAAKLRSTLRTIPELEAQIQYPELFSFKT
PLEIELSGYELEQLKTSAASLVKALEGDPRFVDVSSSLRDGQPELSIRFDHARMAALGLD
APTVATSIAQRVGGTVASKYTLRERKIDILVRSELDERNQISDIDAMLINPSSPQPIPLS
AVADVSLTLGPSAINRISQQRVAIVSANLAYGDLNQAVASAKHILSQLTLPASVQSRFGG
QNEEMEHSFQSLKIALILAVFLVYLVMASQFESLLHPLLILMAVPMALSGSIYGLAITGT
QLSVIVFIGLIMLAGIVVNNAIVLVDRINQLRQSGKPRLDAIKQAAASRLRPILMTTLTT
NLGLLPMAIGLGDGSEVRAPMAITVIFGLSLSTLLTLVVIPVLYALFDRKQFAEPVTMGE
GA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtctattattaccacttcggtcaagcgtccggtgaccgtctggatgtttatgctggcc
gttatcctgttcggcatggtgggtttctcccgtctggcggtaaagctgttgcccgacttg
agctaccccacactcaccatacgtaccctctacgagggcgcggcacccgtggaggtagag
cagcttatctccaaacctatcgaggaagcggtcggcattgttaaaggcttgagacagata
agttcgatttcccgttccggtatgtccgatgtggtgctcgaatttgaatggggcacagag
atggatatggccagtctcgatgtgcgggaaaaactcgacaccatagagctgccgctggat
gtgaaaaagcctttgttgctgcgctttaatcccaatctcgatcccatcatgcgcctggca
ctgccggcccccaaggccacagaagccgagctcaagcgcctgcggacttatgccgaagag
gagcttaagcgggatctcgagtcactttccggagtcgctgccgtgcgcctttccggcggg
ctggagcaggaagtgcatattctgctcaatcaacagaaactggcacagctggatctcagc
agcgaagccattcgcaatcgcatcagtgaagaaaacgtcaacctttctgccggtaaggtg
atccagggcgaccgcgaatatctggtgcgcaccgttaaccagtttcactccctcgatgag
ctggccaatgtgattgtctatcaaaagggcaataccctggtacgtcttggcgaaatagca
gaggtcacagatgcctttaaagagcgcagcgatatcacccgcatcggcggcaaggagtcc
attgagctcgccatctataaggagggcgatgccaatacggtagccgtagccagtaagctt
aagagccagttgcaacagatgcgctccgaggccaaagacagcgccacgccagtgcccgag
ataatttacgatcagtcggagtttatcgaaagcgccgtcagcgaagtgacctcatcagcc
cttatcggcagtctgctggcaatgctggtgatctacctgttccttcgagacatcatccct
accctgatcatctccatctctatccccttctccgtgatagccacctttaacatgatgtat
tttgccgatatcagtcttaacatcatgtcgctcggcggtatcgcgctggcggtggggctg
ttggtggataacgccatcgtggtgctggaaaacatcgacaggtgcaaggctcaggggatg
gatcgccgtcaggccgccatcacaggaaccaaagaggtggccggggcgatttttgcctct
accctaaccacgctggcggtatttgtgcccttggtatttgtcgacggcattgccggggcc
ctgtttgccgatcaggccctgaccgttactttcgccctgctggcctctttgctggttgcc
ctcacctcgattcctatgttggcttcccgcgaaggcttcactatgttgccggaactggtc
aagcgtgacaaaccgcagcctccggcgggtaagcttggcaaactcaagcattacagcgcc
actgtgtttactttccctttcctgttgctgctcagctatctgccaagattgctgctgaca
ctggtgttaatcgtcacccggctgctggtgtggctggtatccctggtgatgaagccgctg
tccagactgtttaacctttgctacggctggctggccgatggctatcggccgctgctgaac
ctggcactcaagttccgtggcatcactctggcgctggccattgcggtcaccgccatctcg
ggcgtcttgatgagccgcctgggaatggagctgatcccaccaatgaatcaaggcgaattc
tatgtggaaatcctgctgcctcccggcagtgaggtgagccaaaccgatgccgtattgcaa
cgtctggcgctggctatcaaggacagagaggaagtgaaacacgcctacagccaggccggc
agcggtggtctcatgacttcggatacccggcgcggcggcgaaaactgggggcgtctgcag
gtggtgctggccgatcaccgcgcgtttgaccaagttgccgccaagctgcgcagcacgttg
cgcactattcccgagctggaagcgcagatccaatatcccgagctgttcagcttcaagact
ccgctggagatagagttgtccggctatgaattggaacagttgaaaacctcggccgcttca
ttggttaaggcgctggagggcgatccccgctttgtcgatgttagcagcagcctgcgtgac
ggtcagccggagctgagtatccgttttgatcacgccagaatggcggcccttggcttggat
gcgccaaccgtggccaccagcatagcccagcgggttggcggtaccgtagccagcaaatac
actctgagagagcgcaagatagatattctggtgcgcagcgagttggatgaacgcaatcag
ataagcgatatcgatgccatgctgatcaacccatccagcccgcagcccatccccttgagc
gccgtggccgatgtctcgctgactctgggaccttcggcaatcaatcgcatcagccagcag
cgggtagccatagtgtcggccaatctggcctatggcgatctcaatcaggcagtggccagt
gccaagcacattctcagccaactgacactacccgcctcggtgcagagccgattcggcggt
cagaatgaagagatggagcattcgttccaatcgctgaagatagcgctgatcttggcggta
ttcctggtttatctggtgatggccagtcagtttgagtcattgctgcaccccttgcttatc
ctgatggctgtacctatggcactgagcggcagtatctacggcctggcgataaccggcacc
cagttgtctgtcatcgtctttatcggccttatcatgctggccgggatagtggtcaataac
gccatagtattggtggacaggatcaatcagctcaggcaaagcggcaaaccacgtctcgac
gccatcaagcaagcggcagcatcgcgtttaagacccatactgatgaccacactgaccacc
aatctggggctgctgcccatggcaataggcttaggagacggcagcgaagtgcgcgcgccg
atggcgatcactgtgattttcggcctcagcctgtcgactctgctgactctggtggttatt
cctgtgctctatgccctgttcgaccgcaaacagttcgccgagccggtcaccatgggagaa
ggcgcatga
DBGET
integrated database retrieval system
