Shewanella carassii: TUM17387_18460
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Entry
TUM17387_18460 CDS
T07543
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
scaa
Shewanella carassii
Pathway
scaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUM17387_18460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_18460 (nth)
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TUM17387_18460 (nth)
DNA repair and recombination proteins [BR:
scaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUM17387_18460 (nth)
Prokaryotic type
TUM17387_18460 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BCV66487
LinkDB
All DBs
Position
complement(2058501..2059142)
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AA seq
213 aa
AA seq
DB search
MNKDKRRAILERLRDNNPHPQTELNYSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
PQAIADLGVEGLKEYIKTIGLYNNKAINVVALSKILVEQYNGEVPENREALESLPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVQEVEDKLLKVVPTEFKVDVHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFKDKVYPED
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagacaagagacgggcgatactcgaacgcctgcgggacaacaatcctcatccc
cagacagagctgaattattccagcccttttgaattactggtcgcggtaacgctttcggcg
caggcaaccgatgtcagtgtcaacaaggccactgacaagctgtttccggtggccaatacc
ccgcaggctatcgcagacctcggggttgaagggctgaaggagtatatcaagaccataggg
ctctataacaataaggccatcaatgtggtggcactgtccaagatccttgtcgagcagtac
aacggcgaagtccctgaaaaccgcgaggcgctggagtcactgcccggggtcggccgtaag
accgccaatgtggtgctcaacaccgcttttggttggccaaccatagccgtcgacactcat
attttccgggtcagcaaccgcacccgctttgcgccggggaaaaatgttcaggaagtagaa
gataaactgctcaaagtggtgccgaccgagttcaaagttgacgtccaccactggcttatt
cttcacgggcgctatacctgcatcgccagaaagccccgttgtggcagttgcctgattgaa
gatctgtgtgaatttaaagacaaggtctacccagaagattaa
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