Shewanella carassii: TUM17387_21850
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Entry
TUM17387_21850 CDS
T07543
Symbol
rlmL
Name
(GenBank) ribosomal RNA large subunit methyltransferase K/L
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_21850 (rlmL)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
TUM17387_21850 (rlmL)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
TUM17387_21850 (rlmL)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TUM17387_21850 (rlmL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
RlmL_1st
Methyltransf_31
THUMP
Cons_hypoth95
Methyltransf_25
Methyltransf_11
Methyltransf_15
N6_N4_Mtase
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
BCV66826
LinkDB
All DBs
Position
complement(2462014..2464143)
Genome browser
AA seq
709 aa
AA seq
DB search
MLNFFAAAPKGFEYALAQELREFGALEVKESLAGVYFSCPLEQAYRITLWTRLASRILLI
LHRGPCDSAEQLYNAAFCIDWPSHFDNRCTFSIDFHGMGGFIKNTQFGALKIKDAVVDRF
REDDLNRPNVQRVDADFKIDAHYRNGQVTIALNFSGPALHQRGYRSGTGEAPLKENLAAN
MLARAQWDKQTPLLDPFCGSGTVLIEAAMIAADMAPGLQRSRFGFEHWHRHDAKLWQSIV
EEAKARASIGKNRCEVKFFGSDIDSRMVALAKRNAKSAGVSDLIEFSVANALNITPPLDK
GLLISNPPYGERLGNVSSLLQLYYQFGDKLKREFGGWQVALLCSDIELISSLKLKADKQM
KMFNGALECAFNLYTLHANSTRRAAVAAEQSGAEVSDIASAFANRVKKNLKQLDKWARKE
GIDSYRLYDADIPEYNVAIDKYLDYVVIQEYAAPASIPEAVSKRRLTDVLLSLPGAIGVE
PDKIILKTRERQKGTNQYQRLDKEKLELVTQEYGARFKLNLTDYLDTGLFLDHRLIRKLV
GSKANGRDVLNLFAYTGTASVHAGLGGAKSVTTVDMSNTYLNWAKDNFVLNGLIGKQYRF
EQGDCLQWIRDCDRKFDLIFIDPPTFSNSKRMEDSFDVQRDHVKLLSDLFKLLNPGGEII
FSNNKRKFKMDSEAMAAQGMSVTNMDAQMLPMDYKRNPHIHNTWLITHA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttttttgcggcggcccccaaggggtttgaatatgctttggcgcaggaactg
cgcgagttcggtgcgcttgaggtcaaggaaagtttggccggggtctatttttcctgtcca
ctggagcaggcataccgcattactctttggaccagattggcaagccgtattcttcttata
ttgcatcgcgggccctgtgactcagcagaacagctttataatgctgctttctgtatcgac
tggccgagccactttgacaaccgttgtacctttagtatcgactttcacggcatgggcggt
tttatcaagaacacccagttcggggccctcaagattaaagatgctgtggtggatcgtttc
cgcgaagatgatcttaaccgtcccaatgtgcaacgtgttgatgccgacttcaaaatcgat
gctcactaccgtaacggccaggtaaccatagcgctgaacttctccgggccggcgctgcat
caacgtggttatcgcagcggtaccggtgaggcgccattgaaagagaatctcgctgccaac
atgttggcccgcgcccaatgggataaacaaacgcctttgctggatccattttgtggcagt
ggcactgtgttgattgaggcggctatgatagcggccgatatggcccccggactgcaacgc
agtcgctttggctttgagcactggcatcgccatgacgccaaactttggcaaagcatagtc
gaggaagccaaagcgcgcgccagcataggcaagaaccgttgtgaagtgaagttcttcggc
tcggacatagactcgcgcatggtggcgctggccaaacgtaatgccaagagcgccggtgtc
agtgatctgatcgagttcagtgttgccaatgctctcaatattacgccaccgctggacaaa
ggcttattgatctccaacccgccttatggcgagcgtttgggcaatgtctcctccttgttg
cagctttactatcagtttggcgacaagctcaagcgtgagtttggtggttggcaagtggcc
ttgctttgcagtgatatcgaattgatctcatcgcttaagctcaaggccgacaagcagatg
aagatgttcaacggggcacttgagtgcgcctttaacctctataccctgcatgccaattct
acccgcagggcggcggtggcagccgagcagtcgggggctgaggtcagtgacatcgccagt
gcctttgccaaccgggtgaaaaagaatctgaaacaattggataagtgggcccgtaaagag
gggatcgacagttatcgcctctatgacgcagatattcctgaatataatgtcgctatcgac
aagtatctggattatgtggtgattcaagagtatgcagcgcctgccagcatacctgaagcc
gtcagcaagcgacgtttgaccgatgtgcttctgtctttgcccggcgccataggtgttgag
ccggacaagatcatcctcaagacccgcgagcggcagaagggtacaaatcagtaccagcgg
ctcgacaaagaaaagctggagctggttacccaggagtatggtgcccgtttcaaacttaac
ctgaccgactatctggataccgggttgtttctcgatcacaggcttattcgcaaactggtg
ggcagtaaagccaacggccgtgatgtactcaacctgttcgcctatacgggaaccgcgtcg
gtacacgccgggcttggcggtgccaagtcggtcacgacagtggatatgtccaacacttac
cttaactgggccaaggataactttgtgctcaatggtttgattggcaaacagtatcgtttc
gagcagggggactgcctgcaatggatccgcgattgtgaccgcaagttcgatcttatcttt
atcgatccgccaaccttctccaactccaaacggatggaagactcattcgatgtgcagcgc
gatcacgtcaagttgttgtctgatctattcaaactgctcaatccgggcggagagataatc
ttttccaacaataaacgtaagttcaaaatggatagcgaagccatggcggctcagggcatg
tcagttaccaatatggatgcccagatgctgccaatggattacaagcgcaatccgcatatt
cataatacctggttgatcacccatgcctga
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