Shewanella carassii: TUM17387_29800
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Entry
TUM17387_29800 CDS
T07543
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
scaa
Shewanella carassii
Pathway
scaa00020
Citrate cycle (TCA cycle)
scaa00270
Cysteine and methionine metabolism
scaa00620
Pyruvate metabolism
scaa00630
Glyoxylate and dicarboxylate metabolism
scaa00680
Methane metabolism
scaa00710
Carbon fixation by Calvin cycle
scaa00720
Other carbon fixation pathways
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01120
Microbial metabolism in diverse environments
scaa01200
Carbon metabolism
Module
scaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scaa_M00012
Glyoxylate cycle
scaa_M00168
CAM (Crassulacean acid metabolism), dark
scaa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TUM17387_29800 (mdh)
00620 Pyruvate metabolism
TUM17387_29800 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
TUM17387_29800 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
TUM17387_29800 (mdh)
00720 Other carbon fixation pathways
TUM17387_29800 (mdh)
00680 Methane metabolism
TUM17387_29800 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
TUM17387_29800 (mdh)
Enzymes [BR:
scaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
TUM17387_29800 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
BCV67621
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All DBs
Position
complement(3368262..3369197)
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AA seq
311 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAG
EDPTPALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAATCPKALIGIITNP
VNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAEAKGLNVADVKVNVIGGHSGV
TILPLLSQVEGVSFSDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAFRFGLSLIR
GLQGEANVIECAYVDGGSEHAEFFAQPVVLGKNGIEKVLPYGELSAFETNARDAMLDTLK
ADIKLGVDFVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgtacttggtgctgctggtggtatcggccaggctcttgcccttctgttg
aaaacccaattgcctgccggctctcagctgtcactctatgatatcgcccccgtaacgcct
ggggttgccgtggatctgagtcatatcccgacagcagttgaagttaaaggttttgccggt
gaagacccaacgcctgcactggaaggtgccgatgtggtgctgatctctgccggtgttgcc
cgtaagccgggcatggatcgttctgatctgttcaatatcaatgccggtatcgtccgtaac
ctgattgaaaaagtggccgcgacttgtcccaaggcgctgatcggtatcatcactaaccca
gtgaacaccactgtggccattgctgctgaagtactgaaaaaagccggtgtttacgacaag
aaccgtctgttcggtgtgacgactcttgatgtcatccgctctgaaacctttatcgccgaa
gccaaagggctgaacgttgccgatgttaaagtcaatgtgattggcggccacagcggtgtg
accattctgcctctattgtctcaggttgaaggtgtcagcttctctgatgaagaagttgct
gccctgaccaagcgtattcaaaacgccggcactgaagtggtggaagccaaagccggtggc
ggcagcgcaactctgtccatgggccaggccgctttccgtttcggtctgtcgctgatccgc
ggcctgcagggtgaagccaatgtgatcgagtgcgcctatgtagacggtggcagtgaacac
gctgaattttttgcccagccagtggtactcggcaaaaatggtatcgaaaaggttctgcca
tatggtgaactgagcgcatttgaaaccaacgcccgtgatgccatgctggataccttgaaa
gcggatatcaaactgggtgtagacttcgttaagtaa
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