Shewanella carassii: TUM17387_37900
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Entry
TUM17387_37900 CDS
T07543
Symbol
ubiC
Name
(GenBank) putative chorismate pyruvate-lyase
KO
K03181
chorismate lyase [EC:
4.1.3.40
]
Organism
scaa
Shewanella carassii
Pathway
scaa00130
Ubiquinone and other terpenoid-quinone biosynthesis
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01240
Biosynthesis of cofactors
Module
scaa_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
scaa_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
TUM17387_37900 (ubiC)
Enzymes [BR:
scaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.40 chorismate lyase
TUM17387_37900 (ubiC)
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GFIT
Motif
Pfam:
Chor_lyase
Motif
Other DBs
NCBI-ProteinID:
BCV68431
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All DBs
Position
4320150..4320728
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AA seq
192 aa
AA seq
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MNVTSLSFPYGESIQWFSPEQSQQLPAAPLHDWLLATGSLTKRLKSCCHHFEVRLLGEAM
LPTATQEWQGKEHKAIWIREVLLCLDGTPWVFGRTLIPAKLLEQQQRLGKLGTRPLGELL
FGDIGFEPGAIEVASFDNHSRVASLANSLSQPTTEAIWGRRRYFHFQEQQLIVGEIFLPA
AVAAINQGQLTP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaccagtttaagctttccttatggtgaatcaattcagtggttttcgccagag
caatcacaacaactccccgcagcaccattgcatgattggctgctggcgaccggcagtctc
accaagagactcaagagctgctgtcatcattttgaggtcagactgctcggcgaagccatg
ctgcccaccgcgactcaagagtggcagggtaaggagcacaaagccatctggatcagagag
gtgttgctctgcctggacgggaccccctgggtctttggccgcaccctgatcccggcaaag
ctgctggagcaacagcagagactgggtaagttgggtactcgccccctgggagagttgtta
ttcggcgatatcggctttgaacccggcgccatagaggttgccagcttcgacaaccattca
cgggtcgcttccctagccaattcactgtcgcaacccaccacagaggctatctggggcaga
agacgttatttccactttcaggaacagcagctgattgtcggtgaaatcttcctgccggcg
gcggttgccgccatcaatcaaggccaacttacgccttga
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