Sphingomonas cannabina: LZK98_01095
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Entry
LZK98_01095 CDS
T08607
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
scab
Sphingomonas cannabina
Pathway
scab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZK98_01095 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_01095 (nth)
Enzymes [BR:
scab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LZK98_01095 (nth)
DNA repair and recombination proteins [BR:
scab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LZK98_01095 (nth)
Prokaryotic type
LZK98_01095 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
UIJ45590
LinkDB
All DBs
Position
complement(221250..221930)
Genome browser
AA seq
226 aa
AA seq
DB search
MNKADVVEFFARLAADNPHPETELEYTNPFTLLVAVVLSAQMTDAGVNKATRRLFAEADT
PEKMAALGVDTLRERIRTINFYNTKAKNVIALSEALIRDHGGKVPADREALEQLPGVGRK
TANVVLNSAYGQETFAVDTHIFRVCNRTRLAPGKDPLAVEHKLEKTVPQPFRIHAHHWLI
LHGRYTCKARVPECWRCIVADLCPYQPKTPPPTARKTSSAAAKGEP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggcggacgtcgtcgagttcttcgcgcgccttgccgccgacaatccgcacccg
gagaccgaactcgaatacaccaatcccttcaccttgctggtggcagtggtgctgtcggca
cagatgaccgacgccggcgtcaataaagcgacgcggcggctgttcgccgaggccgacacg
ccggagaagatggccgcactcggtgtcgacacgctgcgcgagcgcattcgcacgatcaac
ttctacaacaccaaggcgaagaacgtgatcgcgctcagcgaggcgctgatccgtgaccac
ggcgggaaggtccccgccgaccgcgaggcgctggagcagctgcccggagtcgggcgcaag
accgccaacgtggtcctgaactcggcctacgggcaggagaccttcgcggtcgacacccac
atcttccgcgtgtgcaaccgtacccgcctagcccccggcaaggacccgctcgcggtcgag
cacaagctcgagaagaccgtgccgcagccgttccgcatccacgctcatcactggttaatc
ctgcacggccgatacacgtgcaaggccagggtgcccgagtgctggcgctgcatcgtcgcc
gacctctgcccctaccagcccaagaccccgccgccgacggcccgcaagacatcatccgcc
gcggctaaaggagagccgtga
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