Sphingomonas cannabina: LZK98_03035
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Entry
LZK98_03035 CDS
T08607
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00270
Cysteine and methionine metabolism
scab00620
Pyruvate metabolism
scab00630
Glyoxylate and dicarboxylate metabolism
scab00680
Methane metabolism
scab00710
Carbon fixation by Calvin cycle
scab00720
Other carbon fixation pathways
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scab_M00012
Glyoxylate cycle
scab_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_03035 (mdh)
00620 Pyruvate metabolism
LZK98_03035 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LZK98_03035 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LZK98_03035 (mdh)
00720 Other carbon fixation pathways
LZK98_03035 (mdh)
00680 Methane metabolism
LZK98_03035 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LZK98_03035 (mdh)
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LZK98_03035 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
ThiF
Glyco_hydro_4
F420_oxidored
MAP7
Motif
Other DBs
NCBI-ProteinID:
UIJ45944
LinkDB
All DBs
Position
603981..604943
Genome browser
AA seq
320 aa
AA seq
DB search
MARKKIALIGAGNIGGTLAHLAALKGLGDIVLFDVVEGVPQGKALDLSQCGPVEGFDAKI
TGSNDYADIAGADVIIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIAQNAPDAFVICIT
NPLDAMVWALREFSGLPHQKVVGMAGVLDSARFTTFLAEEFNVSVQDVNSFVLGGHGDTM
VPVLEYSTVSGIPVSDMIKMGFSTKERIDEIVKRTRGGGGEIVALLKTGSAYYAPATSAI
AMAESYLYDQKRVLPAAVHLTGQYGVDDLYVGVPCIIGAGGVEKVVEIALSDEAKANLQV
SVDAVKELLVACKGIDASLN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagaagatcgcgctgatcggcgccggcaacatcggcggcacgctcgcccat
ctcgccgcgctcaagggactcggcgacatcgtgctgttcgacgtcgtcgagggcgtgccc
cagggcaaggcgcttgatctgtcgcagtgcggtccggtcgagggcttcgacgcgaagatc
accggctccaacgactatgccgacatcgccggcgccgacgtgatcatcgtgaccgccggc
gtcgcccgtaagccgggcatgagccgtgacgacctgctcggtatcaacctcaaggtcatg
aaggcggtcggcgagggcatcgcgcagaacgcgcccgacgcgttcgtgatctgcatcacc
aacccgctcgacgcgatggtgtgggcgctgcgcgagttctcgggtctcccgcatcagaag
gtggtcggcatggccggcgtgctcgattcggcgcgcttcaccaccttcctcgccgaggag
ttcaacgtctcggtgcaggacgtcaattcgttcgtgctcggcggccatggcgacacgatg
gtgccggtgctcgaatattcgaccgtcagcggcatcccggtcagcgacatgatcaagatg
ggcttctcgaccaaggagcgtatcgacgagatcgtcaagcgcacccgcggcggcggcggc
gagatcgtcgcgctgctgaagaccggctcggcctattacgccccggcgaccagcgcgatc
gcgatggcggagagctacctctacgaccagaagcgcgtgctgccggcggcggtgcacctc
accggccagtacggcgtcgacgacctctacgtcggcgtgccgtgcatcatcggcgcgggc
ggcgtcgagaaggtggtcgagatcgcgctcagcgacgaggccaaggccaacctccaggtc
tcggtcgacgcggtcaaggagctgctggtggcctgcaagggaatcgacgcgagcctgaac
tga
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integrated database retrieval system