Sphingomonas cannabina: LZK98_03050
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Entry
LZK98_03050 CDS
T08607
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00785
Lipoic acid metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
scab01210
2-Oxocarboxylic acid metabolism
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_03050
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LZK98_03050
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LZK98_03050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
UIJ45947
LinkDB
All DBs
Position
606442..609381
Genome browser
AA seq
979 aa
AA seq
DB search
MGYEGQDFSEIAGGVSPAFVETLYARFKADPNSVEPGWRQWFEGLESTVSGPSWANPAWP
PKDTDSLTAALDPTQMEPAPAPAKGGKPAPAAAAPAAAPALADIRKAADDSIRAMMLIRT
YRVRGHLAANLDPLGLSKREMPEDLRTEYHGFTDADIDRPVYLGGALGLETATIREIVDI
LRANYCGNVGLEYMHISDVEERRFLQERMEGKDKAIEFTPEGKRAILTKVIQAEQYEKFL
GKKYVGTKRFGLDGGEAMIPALESVIKYGGQYGVREIVFGMAHRGRLNVLTNVMGKPYRV
VFHEFAGGSDNPDDIGGSGDVKYHLGTSTDREFDGISVHMSLVANPSHLEAEDPVVLGKT
RAIQTLANDLEQHTGSLPVLIHGDAAFAGQGIVWECFGFSGLRGYNTGGCIHFVINNQIG
FTTSPQFARSSPYPSDVAKGVQAPVFHVNGDDPEAVTFACKMAIEFRQRFHRDVVIDMWC
YRRFGHNEGDEPSFTQPLMYAAIRKHPDVSKVYGERLIQEGVVDQAWVDEQVKEFTLLLE
GEFEAGASYKPNKADWFAGRWSGLHAPADAESARRNVETGIDKKLFDALGRTLTTVPEGL
AIHKTLGRVLDAKREMFKSGENFDWATGEALAFGALLSEGYGVRLSGQDSGRGTFSQRHA
VWVDQTDEHKYVPLSTVEHGRFEVLDSPLSEYGVLGFEYGYALADPKTLVMWEAQFGDFA
NGAQIMIDQFIAAGEAKWLRANGLVMLLPHGYEGQGPEHSSARLERFLQLCAQDNLQVAN
CTTPANYFHLLRRQMHRTFRKPLIVFTPKSLLRHKLAVSKAEDFLGDSHFRRLLSDPNAP
ADADTKRLVLCSGKVAYDLMEARDAAGDKATQIVRLEQLYPFPGEPLAARIAKMPKLEDV
VWAQEEPKNNGAWFFAAPLLEEVLATAKAPVARPRYAGRAAAASPATGLMKRHQLEQAAL
VADALGHNVREEIRRTKKG
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgaaggccaggatttcagcgagatcgccggaggcgtctcccccgcgttcgtc
gagacgctctatgcgcgtttcaaggcggacccgaacagcgtcgagccgggctggcgccag
tggttcgaggggctggagagcacggtgagcggcccgagctgggccaatcccgcctggccg
cccaaggataccgattcgctgacggcggcgctcgatccgacgcagatggaacctgcgccc
gcgccggcgaagggcggcaagcccgctccggccgccgcggcccccgccgccgctccggcg
ctcgccgatatccgcaaggcggccgacgattcgatccgtgcgatgatgctgatccgcacc
tatcgcgtgcgcggtcatctcgccgccaacctcgacccgctcggcctctccaagcgcgag
atgccggaggacctccgcaccgaataccacggcttcaccgacgccgacatcgaccgcccg
gtctatctcggcggcgcgctcggcctggagacggcgacgatccgcgagatcgtcgatatc
ctgcgcgccaactactgcggcaacgtcggcctcgaatacatgcatatctccgacgtcgag
gagcgccgcttcctccaggagcgcatggagggcaaggacaaggcgatcgagttcacgccc
gagggcaagcgcgcgatcctgaccaaggtgatccaggccgagcagtacgagaagttcctc
ggcaagaaatacgtcggcaccaagcgcttcggcctcgacggcggcgaggcgatgatcccg
gcgctcgaatcggtcatcaagtacggcggccagtacggcgtgcgcgagatcgtgttcggc
atggcgcaccgcggccgcctcaacgtgctgaccaacgtgatgggcaagccctatcgcgtc
gtcttccacgaattcgccggcgggtcggacaatcccgacgacatcggtggctcgggcgac
gtcaagtaccatctcggcacctccaccgaccgcgagttcgacgggatcagcgtccatatg
tcgctggtcgccaacccctcgcatctcgaggccgaggatccggtggtgctcggcaagacc
cgcgcgatccagacgctcgccaacgacctcgagcagcacaccggctcgctgccggtgctg
atccacggcgacgcggccttcgcggggcaggggatcgtctgggaatgcttcggcttctcg
gggctgcgcggctacaacaccggcggctgcatccatttcgtcatcaacaaccagatcggc
ttcaccaccagcccgcagttcgcgcgcagctcgccctatccgagcgacgtggccaagggc
gtccaggcgccggtgttccacgtcaacggtgacgatccggaggcggtgaccttcgcctgc
aagatggcgatcgagttccgccagcgcttccaccgcgacgtcgtcatcgacatgtggtgc
taccgccgcttcggccacaacgagggcgacgagccgtcgttcacccagccgctgatgtac
gccgcgatccgtaagcatcccgacgtcagcaaggtctatggcgagcgcctgatccaggag
ggcgtcgtcgaccaggcgtgggtcgacgagcaggtgaaggaattcaccctgctgctcgaa
ggcgagttcgaggcgggcgccagctacaagcccaacaaggccgactggttcgccggccgc
tggtcgggcctccacgcgcccgcggacgccgagagcgcgcgccgcaacgtcgagaccggc
atcgacaagaagctgttcgacgcgctcggccgcacgctgaccaccgtccccgagggactc
gccatccacaagacgctcggccgcgtgctcgacgccaagcgcgagatgttcaagtcgggc
gagaatttcgactgggcgaccggcgaggcgctggcgttcggcgcgctgctgtcggaaggc
tatggcgtccgcctgtcgggccaggattcgggccgcggcaccttctcgcagcgccacgcg
gtgtgggtcgaccagaccgacgagcacaagtacgtgccgctctccaccgtcgagcacggc
cggttcgaggtgctcgacagcccgctctccgaatatggcgtgctcggcttcgaatacggc
tatgcgctggccgaccccaagacgctggtgatgtgggaggcgcagttcggcgatttcgcc
aacggcgcgcagatcatgatcgaccagttcatcgccgcgggcgaggccaagtggctgcgc
gccaacggcctggtgatgctgctgccgcatggctacgaggggcaggggccggagcatagc
tcggcgcggctggagcgcttcctccagctctgcgcgcaggacaatctccaggtcgccaac
tgcaccacgccggccaattatttccacctgctgcgccggcagatgcaccgcaccttccgc
aagccgctgatcgtgttcacgcccaagtcgctgctgcgccacaagctcgcggtgtcgaag
gcggaggacttcctcggcgacagccatttccgccgtctgctgtcggaccccaacgccccg
gccgatgccgacaccaagcggctggtgctgtgctcgggcaaggtcgcctacgacctgatg
gaggcgcgcgacgccgccggcgacaaggccacccagatcgtccgcctcgagcagctctat
cccttccccggcgagccgctcgccgcgcggatcgcgaagatgccgaagctcgaggacgtg
gtgtgggcgcaggaggagccgaagaacaacggcgcctggttcttcgccgcgccgctgctc
gaggaagtgctggcgaccgccaaggcgccggtcgcgcgcccgcgctacgccggccgcgcc
gccgccgcctcgccggcgaccggcctgatgaagcgccaccagctcgaacaggccgcgctc
gtcgccgacgcgctcggccacaatgtccgcgaagagattcggcggacgaagaaggggtag
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