Sphingomonas cannabina: LZK98_06400
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Entry
LZK98_06400 CDS
T08607
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00270
Cysteine and methionine metabolism
scab00450
Selenocompound metabolism
scab00670
One carbon pool by folate
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01230
Biosynthesis of amino acids
scab04980
Cobalamin transport and metabolism
scab04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LZK98_06400 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LZK98_06400 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LZK98_06400 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LZK98_06400 (metH)
04980 Cobalamin transport and metabolism
LZK98_06400 (metH)
Enzymes [BR:
scab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LZK98_06400 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UIJ46574
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Position
1317167..1319818
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AA seq
883 aa
AA seq
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MTPSSTNFVNVGERTNVTGSAAFKKLIMAGDYAKAVDVARQQVENGAQVIDVNMDEGLLD
AVEAMTTFLKLIAAEPDIARVPVMIDSSKWEVIEAGLKCVSGKPIVNSISMKEGEQPFLD
HARKCMAYGAAVVVMAFDEVGQADTQARKVEICERAYKLLTGIGFPPEDIIFDPNVFAVA
TGIEEHNNYAVDFIEATREIKKRCPHVHISGGLSNLSFSFRGNEPVRRAMHSVFLYHAIP
AGMDMAIVNAGQLDVYDTIDPELRTACEDVILNRDPEAGERLVALAERFRGTDAAAEKAA
EEWRGWDVAKRLEHALVKGIDAHIVDDTEEARLAFARPIEVIEGPLMDGMNVVGDLFGSG
KMFLPQVVKSARVMKKAVAHLLPFIEAAKEEGAKGKGKVVMATVKGDVHDIGKNIVGVVL
QCNGFEVVDLGVMVPWSRILEAANENDADMIGLSGLITPSLDEMVTVAEEMTRAKMTMPL
LIGGATTSKVHTALRIAPAYEGPVVHVLDASRAVGVATTLVSDTQRDDYVAKVAADYAAV
RAAREGKGQSELLPIEKARANAFPADMALKPGKPKQPGVHVFPDWDLADLRECIDWTPFF
RAWELAGVYPAILDDKLVGESARSLFADAQKMLDRIIAEKWLTARGVVGLWPCVRHDDDV
FVDPEGVWTPEELKSLDHLGLIESDSLVRLPFLRQQIAKREGRANMCLADFVDRDGDWIG
GFAVSIHGIEPHLARFKAAIDDYSDILLKALADRFAEAFAERLHQHVRTTLWGYAEGEQL
DNEALIREQYRGIRPAPGYPACPEHSLKPLLFNMLDAHHATGISLTESFAMLPTAAVSGF
YFGHPQAEYFGVARIGPDQLEDYAARRGVSVEQATRWLRPNLD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatcctccaccaatttcgtcaacgtcggcgagcggaccaacgtcaccggctcc
gccgcgttcaagaagctgatcatggccggcgactatgccaaggcggtcgacgtcgcgcgc
cagcaggtcgagaacggcgcgcaggtgatcgacgtcaacatggacgagggcctgctcgac
gccgtcgaggcgatgacgaccttcctcaagctgatcgccgccgagcccgacatcgcgcgc
gtgccggtgatgatcgacagctcgaaatgggaagtgatcgaggccgggctcaagtgcgtg
tcgggcaagccgatcgtcaactcgatcagcatgaaggagggggagcagccgttcctcgac
catgcccgcaaatgcatggcctatggcgccgcggtcgtcgtcatggcgttcgacgaggtc
ggccaggcggacacccaggcccgcaaggtcgagatctgcgagcgtgcctacaagctgctg
accggcatcggcttcccgcccgaggacatcatcttcgatcccaacgtgttcgcggtggcg
acgggcatcgaggagcacaacaactacgccgtcgacttcatcgaggcgacgcgtgagatc
aagaaacgctgcccgcacgtccacatctcgggcggcctgtcgaacctcagcttcagcttc
cgcggcaacgagccggtgcgccgcgcgatgcattcggtgttcctctaccacgcgatcccc
gccggcatggacatggcgatcgtcaacgcggggcagctcgacgtctacgacacgatcgat
ccggagctgcgcaccgcctgcgaggacgtaatcctcaaccgcgatcccgaggccggcgag
cggctggtcgcgctggccgagaggttccgcggcaccgacgcggcggccgagaaggcggcc
gaggaatggcgcggctgggacgtcgccaagcggctcgagcacgcgctggtcaagggcatc
gacgcccatatcgtcgacgatacagaggaggcacgcctggcgttcgcccggccgatcgag
gtgatcgagggcccgctgatggacggcatgaacgtggtcggcgacctgttcggctcgggc
aagatgttcctgccgcaggtggtgaagtcggcgcgcgtgatgaagaaggcggtcgcccac
ctgctccccttcatcgaggccgcgaaggaggagggcgccaagggcaagggcaaggtcgtg
atggccaccgtcaagggcgacgtccacgacatcggcaagaacatcgtcggcgtggtgctc
cagtgcaacggcttcgaggtggtcgacctcggcgtgatggtgccctggtcgcggatcctg
gaggctgccaacgagaacgacgccgacatgatcggcctctccggcctcatcaccccttcg
ctcgacgagatggtgacggtcgccgaggagatgacccgcgccaagatgacgatgccgctg
ctgatcggcggcgcgaccacgtcgaaggtccacaccgcgctccgcatcgcgccggcctat
gaggggccggtggtgcatgtgctcgacgccagccgcgcggtcggcgtcgccacgacgctg
gtcagcgacacccagcgcgacgactatgtcgccaaggtcgccgccgactatgccgccgtc
cgcgccgcgcgcgagggcaagggccagagcgagctgctgccgatcgagaaggcgcgcgcc
aacgccttccccgccgacatggcgctcaagcccggcaagccgaagcagcccggcgtccat
gtcttccccgactgggacctcgccgacctgcgcgagtgcatcgactggacgccgttcttc
cgcgcctgggagctggccggggtctatcccgcgatcctcgacgacaagctggtcggcgag
agcgcgcgcagcctgttcgccgacgcgcagaagatgctcgaccgcatcatcgccgagaaa
tggctgaccgcgcgcggcgtggtcgggctgtggccgtgcgtgcgccacgacgacgacgtg
ttcgtcgatcccgagggtgtgtggacgcccgaggagctgaagtcgctcgaccacctcggc
ctgatcgaaagtgacagcctcgtccgcctgccgttcctgcgccagcagatcgccaagcgc
gaggggcgggcgaacatgtgcctcgccgatttcgtcgaccgcgacggcgactggatcggc
ggcttcgcggtctcgatccatggcatcgagccgcacctcgcgcggttcaaggcggcgatc
gacgactattcggatatcctgctgaaggcgctcgccgaccgcttcgccgaggcgttcgcc
gagcggctgcaccagcatgtccgcacgacgctctggggctatgccgagggcgagcagctc
gacaacgaggcattgatccgcgagcagtaccgcggcatccgcccggcgccgggctatccc
gcctgtcccgagcacagcctcaagccgctgctgttcaacatgctcgacgcgcaccatgcg
accggcatcagcctgacggagagcttcgcgatgctgccgactgcggcggtcagcggcttc
tacttcggacacccgcaggcggaatatttcggcgttgcgcggatcggcccggaccagctc
gaggactatgccgcccggcgcggcgtgagcgtcgagcaggcgacccgctggctgcggccg
aatttggattag
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