Sphingomonas cannabina: LZK98_09525
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Entry
LZK98_09525 CDS
T08607
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_09525
01503 Cationic antimicrobial peptide (CAMP) resistance
LZK98_09525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scab03036
]
LZK98_09525
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09525
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_09525
Chromosome and associated proteins [BR:
scab03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LZK98_09525
Transporters [BR:
scab02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LZK98_09525
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UIJ47155
LinkDB
All DBs
Position
complement(1979871..1981079)
Genome browser
AA seq
402 aa
AA seq
DB search
MAWRAGVMALALVLGACSGGDAAQQKGGSGGRGGGGGGPATVGYVVVQPTSVPVTTELAA
RTAAFETSEVRPQVSGIIQKRLFTEGGIVRAGQTLYQIDPSIYRASANQASANLSAAAAQ
LEAARIRADRYKPLAAAEAVSKQDYTDAVAQARQAQASVAQNRAALESAQVNLRFTRVPA
PITGRIGRSLATVGALVTSNQADPLAVIQRLDPMFVDIQQSSTDLLTLRRSLASGNIVPT
SAQVRLKLEDGTDYGYTGTVQFSEVTVDQGTGTVTLRATFPNPDGLLLPGMFVRATFAQG
INNNAFLVPQAAVMRDPQGNATVYVVGPNNKAVRRQITAPRAQGAFWVVTSGLKAGDKVI
TQGIARLRPDADIKPVPANTPQNIGPPQQGQGQGNAAAPKGR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcgcgcgggcgtcatggcgctggcgctggtgctgggcgcctgcagtggcggc
gatgccgctcagcagaagggcggttcgggcggccgtggcggcggcggcggaggtccggcg
acggtcggctacgtcgtggtgcagccgacgtcggttccggtgaccaccgagctcgcggcg
cgcaccgccgccttcgagacgtcggaagtccgcccgcaggtctccggcatcatccagaag
cggctgttcaccgagggcggcatcgtccgcgccgggcagacgctctaccagatcgacccc
agcatctatcgggcgagcgccaaccaggcgagcgccaacctgtccgccgccgccgcccag
ctcgaggccgcgcgcatccgcgccgaccgctacaagccgctcgccgcggccgaggcggtg
agcaagcaggactataccgacgcggtcgcgcaagcacgccaggcacaggcctcggtcgcg
cagaaccgcgcggcgctcgaatcggcgcaggtgaacctccggttcacgcgcgtccccgcc
cccatcaccggccgcatcggccgcagcctcgccacggtcggcgcgctggtcaccagcaac
caggccgatccgctcgcggtgatccagcggctcgacccgatgttcgtcgacatccagcag
tcgagcaccgacctcctgacgctgcgccgctcgctcgcctcgggcaacatcgtgccgacc
agcgcgcaggtgcgcctcaagctcgaggacggcaccgactatggctacaccggcaccgtg
cagttctccgaagtgacggtcgatcagggcaccggcacggtgaccttgcgggcgaccttc
cccaatcccgacgggctgctgctgccgggcatgttcgtccgtgcgacgttcgcgcagggg
atcaacaacaatgccttcctggtgccgcaggcagcggtgatgcgcgatccgcagggcaac
gccaccgtctatgtcgtgggcccgaacaacaaggccgtgcggcggcaaataaccgcgccc
cgcgcgcagggggccttctgggtcgtgaccagcggcctcaaggcgggcgacaaggtgatc
acccagggcatcgcgcggctcaggcccgacgccgacatcaagccggtgccggcgaacacc
ccgcagaacatcggccccccgcaacaagggcagggtcagggcaacgccgccgcacccaag
ggccgctga
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