Sphingomonas cannabina: LZK98_09625
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Entry
LZK98_09625 CDS
T08607
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_09625
01503 Cationic antimicrobial peptide (CAMP) resistance
LZK98_09625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scab03036
]
LZK98_09625
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09625
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_09625
Chromosome and associated proteins [BR:
scab03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LZK98_09625
Transporters [BR:
scab02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LZK98_09625
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UIJ47174
LinkDB
All DBs
Position
complement(2003230..2004393)
Genome browser
AA seq
387 aa
AA seq
DB search
MPEPGNNSRLKLAGGIAALAAVAVVGGGIYSRVQSKETLANWTEAQAIPSVTLIRPTPIA
ASDALTLPANLQALNSAPIYARTTGYVRRWLVDLGDPVRRGQLLAILDAPEVEQQLAAAR
ADLQTARANQQLASTTAQRWSTMLAKDAVSKQETDEKLGDLAAKTAVTNAARANVARLQA
LTGFTRLVAPFDGVVTSRSAEIGALVTAGNASAAPLFTVADVGRMRAYVRVPQLYSAQIH
PGMAVKLTLPEYAGRSFDATLTRTAGAVDPASGTVLVELQAPNGDRALKPGAYAQASFPL
RGAGNTVTLPPSALIIGEKGTQVALLGPNGRAVLRTVTLGHDQGKVVEITAGLSPNDRVI
DNPPDSLQTGDPVRPIAPEKGKADAAK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccggcaacaacagccggctgaagctcgccggcggcatcgccgcgctggcg
gccgtcgcggtggtcggcggcggcatctacagccgcgtccagtcgaaggagacgctggcg
aactggaccgaggcgcaggcgatccccagcgtcacgttgatccggcccacgccgatcgcg
gccagcgacgcgctgacgctgcccgccaacctccaggcgctcaacagcgcgccgatctat
gcccgcaccaccggctatgtccgccgctggctggtcgacctcggcgacccggtccgtcgg
ggccagctgctcgccatcctcgacgcgcccgaggtcgagcagcagctcgccgccgcgcgc
gccgacctccagaccgcacgcgccaaccagcagctcgcaagcaccaccgcgcagcgctgg
agcacgatgctcgccaaggacgcggtatcgaagcaggagaccgacgagaagctcggcgac
ctcgccgccaagaccgccgtcaccaacgccgcccgcgccaacgtcgcgcgcctgcaggcg
ctgaccggcttcacccgcctggtcgcgccgttcgacggcgtggtgacaagccgctcggcg
gagatcggcgcactcgtcaccgcgggcaacgcctctgcggcgccgctgttcaccgtcgcc
gacgtcggccggatgcgcgcctatgtgcgggtgccgcagctctattcggcgcagatccac
cccggcatggcggtgaagctcactctgcccgaatatgccggccgcagcttcgacgcgacg
ctgacccgcacggcgggcgcggtcgatccggcctccggcacggtactggtcgagctgcag
gcgcccaacggcgaccgcgcactcaagcccggcgcctatgcccaggcgagcttcccgctg
cgcggcgccggcaataccgtcacgctgccgccgagcgcgctcatcatcggcgagaagggc
acacaggtcgccctgctcggccccaacggccgggcggtactgcggaccgtgacgctcggc
catgatcagggcaaggtggtggagatcaccgccggcctgtcgcccaacgatcgcgtgatc
gacaacccgccggactcgctccagaccggcgacccggtgcgcccgatcgctcccgagaag
ggcaaggccgatgccgcgaaatag
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