Sphingomonas cannabina: LZK98_13375
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Entry
LZK98_13375 CDS
T08607
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_13375
01503 Cationic antimicrobial peptide (CAMP) resistance
LZK98_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scab03036
]
LZK98_13375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_13375
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_13375
Chromosome and associated proteins [BR:
scab03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LZK98_13375
Transporters [BR:
scab02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LZK98_13375
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
UIJ44068
LinkDB
All DBs
Position
2795357..2796601
Genome browser
AA seq
414 aa
AA seq
DB search
MKNIASAIGITLLLAGCGGAPQQPPSGPPQVGVVTVREEPVTLSTELPGRTSAYETSDVR
PQVNGIILARLFEEGDYVRAGQPLYRIDPKPYEAQVANARASLARARAAIASSQALARRY
GELVKINAISRQDAENAITSAQQAQADVAAQQAALRSAEIDLGRTTIRAPISGRIGRSAF
TTGALVSAAQADALAVIQRLDPIYVDIQQSSADLLKLRQQIMSGELASGGNARVRLKLED
GSTYPVEGTLKFTDVTVDPTTGSQVIRAVFPNPRGLLLPGMYVRAELVQGIKSNGMLVPQ
RGVTRDEKGNATALVVGADGKLQPRTLTAPRTVGQNWLVTAGLKPGDRVVVEGAQNLQPG
TPVKAVPFQENAGNQAPGGQQPQGAAPAGEAQNGQAQNGQAPANQPQGNQTQAK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcgcttccgcgatcggaatcacgttgctgctcgcaggctgtggtggtgca
ccgcagcaaccgccgtccggtccgccccaggtcggagtcgtgacggtgcgcgaggagccg
gtgacgctcagcaccgagctgccgggccgcaccagcgcctatgagacctcggacgtgcgt
ccgcaggtcaacggcatcatcctcgcccgcctgttcgaggaaggcgactatgtgcgtgcg
gggcagccgctctaccgcatcgatcccaagccctatgaggcgcaggtcgccaacgcgcgc
gctagcctcgcccgggcgcgggcggcgatcgcctcgtcgcaggcgctcgcgcggcgctac
ggcgagctggtcaagatcaacgccatctcccgccaggatgcggaaaacgcgatcaccagc
gcccagcaggcgcaggccgatgtcgcagcgcagcaggcggcattgcgcagcgccgagatc
gatctcggccgcaccaccatccgcgcgccgatctcgggccggatcggccgctccgccttc
accaccggcgcgctggtctcggccgcgcaggccgatgcgctcgcggtcatccagcggctc
gacccgatctacgtcgatatccagcaatcgagcgccgacctactcaagttgcgccagcag
atcatgtcgggtgagctcgcctccggcggcaacgcacgcgtgcggctgaagctcgaggac
ggctcgacctatccggtcgagggcacgctcaagttcaccgacgtgacggtcgatccgacg
accggcagccaggtgatccgcgcggtcttcccgaacccgcgcggcctgctgctgccgggg
atgtatgttcgtgccgagctggtccagggcatcaagtccaacggcatgctggtgccgcag
cgcggcgtgacgcgcgacgaaaagggcaatgccaccgcgctggtggtcggcgccgacggc
aagctccagccgcgcacgctcaccgcgccgcggacggtcggccagaactggctcgtcact
gcgggcctcaagcccggcgaccgcgtggtcgtcgagggcgcgcagaacctccagcccggc
acgccggtcaaggccgttcccttccaggagaacgccggcaaccaggcgccgggcggccag
cagccgcagggcgccgcgccggcgggcgaggctcagaatggtcaggcccagaacggtcag
gctccggccaatcagccgcaaggcaaccagacacaggcgaagtaa
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