Sphingomonas cannabina: LZK98_20070
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Entry
LZK98_20070 CDS
T08607
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00270
Cysteine and methionine metabolism
scab00450
Selenocompound metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LZK98_20070 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LZK98_20070 (metC)
Enzymes [BR:
scab01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LZK98_20070 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UIJ45307
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Position
complement(4295570..4296757)
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AA seq
395 aa
AA seq
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MSGEHKSATKTITAGRREEWTHGIVSPPVWRASTILYDSVADLRAGAARDTHHRLFYGRR
GTPTQWSLAEALTELEPGAHATLLYPSGVAAVSTALLSVLRPGDELLLVDSAYDPTRNFA
NGLLKSFGVTTRYYDPLIGGDIAGLIGENTRAIFMESPGSLTFEVQDVPAIVAAAKARGV
VTLIDNTWATPLGLPAIGMGVDFSILACTKYIAGHSDVMLGSVTTTEEHWQRLRATSYQL
GQTASPDDAWLGSRGLRTMAVRLERHAASALRIAEWLKERPEVTRVLHPALPDCPGHDLF
VRDFKGGAGLFSFELAGGGEAERAALIDTLELFGIGYSWGGFESLAIPVDPERYRTATRW
EGHGPLVRLSIGLEDPDDLIADLDAGLAAWRAARG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgagcataagtccgccaccaagacgatcaccgccggccggcgcgaggaatgg
acgcacggcatcgtcagcccgccggtgtggcgtgcctcgaccatcctctacgattcggtc
gcggacctgcgcgccggcgccgcgcgcgacacccatcaccgcctgttctacggccgccgc
gggacgccgacccaatggtcgctcgccgaggcgctgaccgagctggagccgggggcgcac
gcgactttgctctatccctccggcgtcgcggcggtgtcgacggcgctgctctccgtgctg
cggccgggcgacgagctgctgctggtggacagtgcctatgacccgacccgcaatttcgcg
aacgggctgctcaagagcttcggcgtcaccacgcgctactacgatccgttgatcggcggc
gatattgccgggctgatcggggagaacacccgcgcgatcttcatggagagcccgggcagc
ctcaccttcgaggtgcaggatgtgccggcgatcgtcgcggcggccaaggcgcgcggcgtc
gtcacgctgatcgacaacacctgggcaacgccgctcgggctgccggcgatcggcatgggg
gtcgatttctcgatcctggcctgcaccaaatacatcgccggccattccgacgtgatgctg
ggatcggtcaccaccaccgaggagcattggcagcggctgcgcgcgacgagctatcagctc
ggccagacggcgagcccggacgatgcctggctcggtagccgcggactccggaccatggcg
gtgcggctggagcgccatgccgcgagcgcgctgcgcatcgccgaatggttgaaggagcgg
ccggaggttacgcgcgtgctccatccggctttgcccgactgtcccggccatgacctgttc
gtccgcgacttcaagggcggcgccggactgttctcgttcgagctggccggcggcggcgag
gccgagcgcgccgccctgatcgacacgctcgagctattcggtatcggctacagctggggc
gggttcgagagtctggcgatcccggtcgatccggagcgttaccgcaccgcgacccgatgg
gaaggccatgggccgctggtccgcctgtcgatcgggctggaggaccccgacgacctcatc
gccgatctcgacgccggcctggccgcgtggcgggcggcgcggggatga
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