KEGG   Streptomyces cadmiisoli: DN051_12810
Entry
DN051_12810       CDS       T07301                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
scad  Streptomyces cadmiisoli
Pathway
scad03030  DNA replication
scad03410  Base excision repair
scad03420  Nucleotide excision repair
scad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:scad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DN051_12810
   03410 Base excision repair
    DN051_12810
   03420 Nucleotide excision repair
    DN051_12810
   03430 Mismatch repair
    DN051_12810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scad03032]
    DN051_12810
   03400 DNA repair and recombination proteins [BR:scad03400]
    DN051_12810
Enzymes [BR:scad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DN051_12810
DNA replication proteins [BR:scad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DN051_12810
DNA repair and recombination proteins [BR:scad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DN051_12810
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DN051_12810
   MMR (mismatch excision repair)
    DNA ligase
     DN051_12810
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DN051_12810
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 HHH Zn_ribbon_TFIIB DNA_meth_N
Other DBs
NCBI-ProteinID: AWW37414
UniProt: A0A2Z4IXD4
LinkDB
Position
complement(3060572..3062767)
AA seq 731 aa
MAGDKQADSTAVPAEARERHARLAEQVEEHRFRYYVKDAPVVSDAEFDQLLRGLEELEEA
YPELRTPDSPTQKVAGSYQTEFTAVEHRERMLSLDNTFNDDDLAAWADRVARELGAQEYH
FLCELKVDGLAVNLTYERGRLVRAATRGDGRTGEDITPNVRTIAEIPDRLHGDRVPDVVE
IRGEVYFPMEKFEELNARLVAAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGA
LEGFQGLNRLSQAYDLLKQWGLPTSPHNRVVDDLDGVREFIAYYGENRHSVEHEIDGVVV
KLDEIPLQGRLGSTSRAPRWAIAYKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVTVA
GSEVEFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPSECP
ECGTPLRPMKEGDVDLRCPNARACPAQLRERLFYLAGRKALDIEHFGYVAAAALTAPLVP
AEPPLRDEGGLFDLTAEQLLPIRAYVRDQDSGLPKRDPKTGEEKIATVFANQQGEPKKNA
LAMLENIAAAKERPLARFITGLSIRHVGPVAAEALAREFRSIDRIEQATEAELADTEGVG
PIIAASLKEWFAEEWHREIIRRWRAAGVRMEQESTGEDEGPRPLEGLTVVVTGTLEHFTR
DGAKEELQRRGAKVTGSVSKKTSFVVVGDSPGSKYDKAMQLKVPVLNEDGFNVLLEQGPE
AASEAAIPAEE
NT seq 2196 nt   +upstreamnt  +downstreamnt
gtggccggcgacaagcaagcggattccacagcggtacccgccgaggcccgggagcggcac
gcgcggctcgccgagcaggtcgaggagcaccgcttccggtactacgtgaaggacgccccc
gtcgtcagcgacgcggagttcgaccagctcctgcgcggcctggaggagttggaggaggcg
tacccggagctgcgcaccccggactcgccgacccagaaggtcgcgggttcgtaccagacg
gagttcacggcggtcgagcaccgcgagcggatgctctccctggacaacaccttcaacgac
gacgacctggccgcctgggcggaccgcgtcgcccgggaactgggcgcccaggagtaccac
ttcctgtgcgagctgaaggtcgacggcctggccgtcaacctgacctacgagcgcggtcgc
ctcgtccgcgcggcgacccgcggcgacggccggaccggcgaggacatcacgcccaacgtc
cgcacgatcgcggagatcccggaccgtctgcacggcgaccgcgtcccggacgtggtggag
atccgcggcgaggtctacttcccgatggagaagttcgaggagctcaacgcccgcctggtg
gccgccggcgacaagcccttcgccaacccgcgcaacgcggcggccggttccctgcgccag
aaggacccgcgcgtcaccgccacccgcccgctgcacatggtcgtccacggcatcggcgcc
ctggagggcttccagggactgaaccggctctcccaggcctacgacctgctgaagcagtgg
ggcctgcccacctccccgcacaaccgggtcgtcgacgacctcgacggcgtacgggagttc
attgcgtactacggcgagaaccgccactccgtggagcacgagatcgacggcgtggtggtc
aagctggacgagatccccctccagggccgcctcggctccacctcgcgcgccccgcgctgg
gccatcgcgtacaagtacgcgccggaggaggtcaacaccaagctcgtcaacatccgcgtc
ggtgtcggacgcaccggccgggtcaccccgtacgcgcaggtggagccggtgacggtggcc
ggttcggaggtcgagttcgccaccctgcacaaccaggacgtggtcaaggccaagggcgtg
ctcatcggcgacacggtggtgctgcgcaaggccggtgacgtcatcccggagatcctcggc
ccggtcgtcgacctccgcgacggcagcgagcgcgagttcgtgatgccctcggagtgcccc
gagtgcgggacaccgctcaggccgatgaaggagggcgacgtcgacctgcgctgcccgaac
gcccgagcctgccccgcccagttgagggagcggctgttctatctcgcgggccgcaaggcg
ctggacatcgagcacttcggctacgtggccgccgccgcgctcaccgcgccgctggtgccc
gcggagccgccgctgcgggacgagggcggcctgttcgacctcaccgccgagcagttgctg
cccatcagggcgtacgtccgcgaccaggacagcggtctgcccaagcgcgatccgaagacc
ggcgaggagaagatcgccaccgtcttcgccaaccagcagggggaaccgaagaagaacgcc
ctggccatgctggagaacatcgccgccgccaaggagcgcccgctcgcccggttcatcacc
ggcctgtcgatccgtcatgtcggcccggtcgcggccgaggcgctggcgcgtgagttccgt
tcgatcgaccggatcgagcaggcgaccgaggcggaactggcggacaccgagggggtcggc
ccgatcatcgccgcctccctcaaggagtggttcgccgaggagtggcaccgggagatcatc
cgcaggtggcgggcggccggtgtccgtatggagcaggagagcaccggcgaggacgagggt
ccccgtccgctcgaaggcctcaccgtcgtcgtcaccggaacgctggagcacttcacccgg
gacggcgcgaaggaggaactccagcgccggggagcgaaggtgaccggttcggtctcgaag
aagacctccttcgtggtcgtgggtgacagcccggggtcgaagtacgacaaggcgatgcag
ctcaaggtgcccgttctgaacgaggacggcttcaacgtccttctggagcaggggcctgag
gcggcgtcggaggcggcgattccggccgaagagtag

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