Streptomyces caniscabiei: IHE65_19580
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Entry
IHE65_19580 CDS
T08931
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IHE65_19580 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_19580 (nth)
Enzymes [BR:
scae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IHE65_19580 (nth)
DNA repair and recombination proteins [BR:
scae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IHE65_19580 (nth)
Prokaryotic type
IHE65_19580 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WEO25202
LinkDB
All DBs
Position
complement(4439476..4440522)
Genome browser
AA seq
348 aa
AA seq
DB search
MSDPSAAENPARKTTAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKAAPAKA
SPVKNAAPVKKAAAARGAAPARRAAQAAAKPESRTALVRRARRINRELAEVYPYAHPELD
FENSFQLIVATVLSAQTTDLRVNQTTPALFAKYPTPEDLAAADPQEVEEILRPCGFFRAK
TKSVMGLSKALVENHGGEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLV
RRWRWTEATDPDKIEAAIGALFPKSEWTMLSHHVIFHGRRICHARKPACGACPIAPLCPA
FGEGETDPEKARKLLKYEKGGFPGQRLKPPQSYLDAGGIPAPPLGAAG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatccatcagcggcggagaaccccgcccggaagaccacagccccggccaaggcg
gccccggccaaggcggccccggccaaggcggccccggccaaggcggccccggccaaggcg
gccccggccaaggcggccccggccaaggcggccccggccaaggcggccccggccaaggcg
tccccggtgaagaacgctgccccggtgaagaaggcggccgcggcgcgcggggccgccccg
gcccggagagcggcccaggcggcggccaagcccgagtcccgtacggccctcgtccgccgg
gcccgtcgtatcaaccgcgaactcgccgaggtgtacccgtacgcccacccggagctggac
ttcgagaactccttccagctgatcgtggcgacggtcctgtccgcgcagacgaccgacctg
cgggtcaaccagacgacaccggcgctgttcgcgaagtaccccacccccgaggacctggcg
gcggccgacccgcaggaggtcgaggagatcctgcggccctgcgggttcttccgggccaag
accaagtcggtgatggggctgtcgaaggccctggtggagaaccacggcggcgaggtcccc
ggccgtctggaggacctcgtcaagctgcccggcgtcggccgcaagaccgccttcgtcgta
ctgggcaacgccttcggccgccccggcatcaccgtggacacccacttccaacggctcgtc
cggcgctggcggtggaccgaggcgaccgacccggacaagatcgaggcggccatcggcgcg
ctcttccccaagagcgagtggacgatgctgtcgcaccacgtgatcttccacggccgccgc
atctgccacgcccgcaagccggcctgcggcgcctgccccatcgccccgctctgtccggcg
ttcggcgagggggagacggacccggagaaggccaggaagctcctgaagtacgagaagggc
ggcttccccggccagcgcctcaagcctccgcagtcctacctggacgcgggcggcatcccg
gccccgcccctcggagccgccggatga
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