Streptomyces camelliae: O1G22_13155
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Entry
O1G22_13155 CDS
T10340
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
scaj Streptomyces camelliae
Pathway
scaj03030
DNA replication
scaj03410
Base excision repair
scaj03420
Nucleotide excision repair
scaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O1G22_13155 (ligA)
03410 Base excision repair
O1G22_13155 (ligA)
03420 Nucleotide excision repair
O1G22_13155 (ligA)
03430 Mismatch repair
O1G22_13155 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaj03032
]
O1G22_13155 (ligA)
03400 DNA repair and recombination proteins [BR:
scaj03400
]
O1G22_13155 (ligA)
Enzymes [BR:
scaj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
O1G22_13155 (ligA)
DNA replication proteins [BR:
scaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O1G22_13155 (ligA)
DNA repair and recombination proteins [BR:
scaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
O1G22_13155 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O1G22_13155 (ligA)
MMR (mismatch excision repair)
DNA ligase
O1G22_13155 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O1G22_13155 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
HHH
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WBO63706
LinkDB
All DBs
Position
complement(2929435..2931633)
Genome browser
AA seq
732 aa
AA seq
DB search
MAGDKQQAETAVPAEARDRHAQLAEQVEEHRFRYYVKDAPVISDAEFDKLLKSLEALEEQ
YPELRTPDSPTQKVAGSYATEFTAVEHRQRMLSLDNTFNDDELAAWADRIARELGDQEYH
FLCELKVDGLAVNLTYENGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLGGDKVPDLVE
IRGEVYFPMEKFLELNERLVAAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGA
LEGFTGMTRLSQAYDLLKTWGLPTSPHNRVVDDLDGVRQFIAHYDGENRHSVEHEIDGAV
IKLDEIRLQGRLGSTARAPRWAIAYKYAPEEVNTKLIDIKVGVGRTGRVTPYAQVEPVTV
AGSEVEFATLHNQEVVKAKGVLIGDTVVIRKAGDVIPEILGPVVDLRDGSEREFVMPAEC
PECGTALRPMKEGDIDLRCPNARTCPAQLRERVSYLAGRECLDIEGFGAVAAAALTRPLE
PADPPLVDEGDLFDLTVEKLLPIKAYVLDPDSGLPKRDPKTGEEKVVTVFANQKGEPKKN
TLALLENVEAAKQRPLARFLNGLSIRHVGPVAAQALAREFRSIDRIEQATEEELATTDGV
GPIIATALKEWFAEEWHREIVRKWKAAGVPLEDEATGEDEGPRPLEGLTVVVTGTLENFT
RDGAKEALQSRGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLNEDGFSVLLEQGP
DAAAEVALPTEE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcgacaagcagcaggcggagacggcagtgcccgccgaggcacgggacaggcac
gcgcagctggcggagcaggtcgaggagcaccgcttccggtactacgtgaaggacgctccc
gtcatcagcgacgcggagttcgacaagctcctgaagtccctggaggccctggaggagcag
tatccggagctgcgcaccccggactcgcccacccagaaggtcgcggggtcgtacgcgacg
gagttcacggcggtcgagcaccgccagcgcatgctgtcgctcgacaacaccttcaacgac
gacgagctggccgcctgggccgaccgtatcgcgcgcgaactcggcgaccaggagtaccac
ttcctgtgcgagctgaaggtcgacggcctcgcggtcaacctgacgtacgagaacggccgc
ctcacgcgcgcggccacccgtggcgacggccgcaccggtgaggacatcacgcccaacgtc
cgtacgatcgccgagatcccggaccgtctggggggcgacaaggtgccggacctcgtggag
atccgcggcgaggtctacttcccgatggagaagttcctcgaactgaacgaacgcctggtc
gcggccggtgacaagccgttcgccaatccccgcaacgcagccgccggttcgctgcgccag
aaggacccgcgggtcaccgccacccgcccgctgcacatggtcgtccacggcatcggcgcc
ctggagggcttcacgggcatgacccgcctctcccaggcgtacgacctgctgaagacctgg
ggcctgcccacctccccgcacaaccgcgtggtggacgacctcgacggcgtacggcagttc
atcgcccactacgacggcgagaaccgccactccgtggagcacgagatcgacggcgccgtc
atcaagctcgacgagatccgcctccagggccgcctcggctccaccgcgcgagcgccccgc
tgggcgatcgcgtacaagtacgcgccggaagaggtcaacaccaagctcatcgacatcaag
gtgggcgtcggccgcaccggccgcgtcacgccgtacgcccaggtcgagccggtcacggtc
gcgggcagcgaggtcgagttcgccaccctgcacaaccaggaggtcgtcaaggccaagggc
gtcctcatcggggacacggtcgtcatccgcaaggccggtgacgtcatcccggagatcctc
gggccggtggtcgacctcagggacggcagcgagcgggagttcgtgatgccggccgagtgc
cccgagtgcggcacggcgctgcggcccatgaaggagggcgacatcgacctccgctgcccc
aacgcgcgtacgtgcccggcccagttgcgcgagcgcgtgtcctacctggcgggccgcgag
tgcctggacatcgagggcttcggcgcggtggccgccgccgcgctgacccggccgctggag
ccggccgacccgccgctggtggacgagggcgacctgttcgacctgacggtggagaagctg
ctgcccatcaaggcctatgtcctcgaccccgacagcggtctgcccaagcgggacccgaag
acgggcgaggagaaggtcgtcacggtcttcgccaaccagaagggcgagccgaagaagaac
accctcgccctgctggagaacgtcgaggcggccaagcagcgcccgctggcccggttcctc
aacggactgtccatccggcacgtcggaccggtggccgcgcaggccctcgcgcgcgagttc
cgttccatcgaccgtatcgaacaggccacggaggaggagctggcgaccaccgacggcgtc
ggccccatcatcgccacggcgctcaaggaatggttcgccgaggagtggcatcgcgagatc
gtccgcaagtggaaggccgccggagtcccgcttgaggacgaggccaccggcgaggacgag
ggcccgcgcccgctggaggggctgaccgtcgtggtcaccggcacgctggagaacttcacc
cgggacggcgccaaggaggcactgcagagccggggcgcaaaagtgaccggatcggtatcg
aagaagacctcgttcgtcgttgtgggtgacaaccccggatcgaagtacgacaaagccatg
caattgaaggtcccggtcctgaacgaagatggtttctcggtcctcttggagcagggcccg
gacgccgcggccgaagtcgcgcttccgaccgaggagtag
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