Streptomyces californicus: I6J39_07540
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Entry
I6J39_07540 CDS
T07611
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scal
Streptomyces californicus
Pathway
scal00300
Lysine biosynthesis
scal00550
Peptidoglycan biosynthesis
scal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6J39_07540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6J39_07540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scal01011
]
I6J39_07540
Enzymes [BR:
scal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
I6J39_07540
Peptidoglycan biosynthesis and degradation proteins [BR:
scal01011
]
Precursor biosynthesis
Amino acid ligase
I6J39_07540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QRV27188
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Position
complement(1667990..1669558)
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AA seq
522 aa
AA seq
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MNYPGAPRPDRLRPTPLGELAERLGVETAGDGDITGITHDSRAVRPGDVYAALPGARLHG
ADFAAQAAGLGAAAVLTDPAGADRAAATGLPVLVTGNPRAVMGELAADIYGRPGIGLLQI
GITGTSGKTTTAYLVEGGLRAAGRPTGLIGTVEMRIGDERIKSERTTPEATDLQALFAVM
RERGVEAVAMEVSSHALVLGRVDGCVFDVAVFNNLSPEHMEFHSGMEDYFQAKAQLFTPE
RSHRGVVNFDDEYGRRLITESGVPVTTFSAEGHPDADWHAEDVEVGPQDSTFTAVGPKGE
RITARAPLPGPFNVANTLAAIVTLAVAGIDPQIAADGVAAVPGVPGRLERVDAGQPYLAV
VDYAHKTDAVESVLRSLRKVTEGKVHIVLGCGGDRDTTKRGPMGAAAARLADTAVLTSDN
PRSEDPLAILSAMLSGAAEVPVHERGDVLVDADRAAAIAAAVARAEPGDTVLVAGKGHEQ
GQDVHGVVRAFDDREVLYAAIERSLAHPGADRAPHHENNSQG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgaactacccgggagcgccccgaccggaccggctccggcccacccccctcggcgagctg
gccgagcggctcggcgtcgaaaccgccggggacggcgacatcaccggcatcacgcacgac
tcacgggccgtgcgccccggtgacgtgtacgcggccctgcccggcgcccgcctccacggc
gccgacttcgcggcccaggccgcgggcctcggcgccgcggccgtcctcaccgacccggcc
ggcgccgaccgcgccgccgccaccggcctgccggtcctggtcaccgggaacccgcgcgcc
gtgatgggcgaactggccgccgacatctacggacggcccggcatcggcctgctccagatc
ggcatcaccggcacctccggcaagaccaccacggcgtacctcgtcgagggcggactgcgt
gccgccggccgccccaccgggctcatcggcaccgtcgagatgcggatcggcgacgagcgc
atcaagtccgagcgcaccacccccgaagccaccgacctccaggcgctgttcgccgtcatg
cgcgaacgcggcgtcgaggccgtcgcgatggaggtctccagccacgccctggtgctcggc
cgggtcgacggctgcgtcttcgacgtcgccgtcttcaacaacctcagcccggagcacatg
gagttccactccggcatggaggactacttccaggcgaaggcccagctcttcacccccgag
cgcagccaccgaggcgtcgtcaacttcgacgacgagtacggccgcaggctcatcaccgag
tccggcgtccccgtcaccaccttctccgccgagggccacccggacgccgactggcacgcc
gaggacgtcgaggtcggcccccaggacagcaccttcaccgccgtcggccccaagggcgag
cggatcaccgcccgcgccccgctgcccggcccgttcaacgtcgccaacaccctcgcggcg
atcgtcacgctggcggtcgcgggcatcgacccgcagatcgccgccgacggcgtcgccgcg
gtccccggcgtcccgggccggctggagcgggtggacgccggacagccctacctcgccgtc
gtcgactacgcgcacaagaccgacgccgtcgagtccgtcctgcgctccctgcgcaaggtg
accgagggcaaggtgcacatcgtcctcggctgcggcggcgaccgcgacaccaccaagcgc
ggcccgatgggcgccgccgcggcccggctcgccgacaccgccgtactgacctccgacaac
ccccgctccgaggaccccctcgcgatcctctccgcgatgctctccggcgccgccgaggtg
cccgtccacgaacgcggcgacgtcctggtcgacgccgaccgggccgccgcgatcgccgcc
gccgtcgcccgcgccgagcccggcgacaccgtcctggtggcgggcaagggccacgagcag
ggccaggacgtccacggcgtggtccgggccttcgacgaccgcgaggtcctgtacgcagcc
atcgagcggtccctggcgcaccccggcgccgaccgtgcccctcaccacgagaacaacagt
cagggatga
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