Streptomyces californicus: I6J39_08555
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Entry
I6J39_08555 CDS
T07611
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
scal
Streptomyces californicus
Pathway
scal00860
Porphyrin metabolism
scal01100
Metabolic pathways
scal01240
Biosynthesis of cofactors
scal03030
DNA replication
Module
scal_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
I6J39_08555
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_08555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_08555
Enzymes [BR:
scal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
I6J39_08555
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
I6J39_08555
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
I6J39_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
DUF2380
Motif
Other DBs
NCBI-ProteinID:
QRV27370
LinkDB
All DBs
Position
complement(1900503..1901975)
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AA seq
490 aa
AA seq
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MSVARQVVVEADGGSRGNPGPAGYGAVVIDPATGEPLAEAAEYIGVATNNVAEYRGLIAG
LTAAKALFPDAGDALRVHVRMDSKLVVEQMSGRWKIKHPDMKPLAARAAAILPPSSVTYE
WIPRAQNKHADRLANEAMDAGRDGRTWEASASTAALDTPSARTASAPPPVQGPPGDQAAG
AARARAALAAARGAAAPEGLFPMPGAQEPEPPVEAAPVTGAAAPAAEPSAAPGAEPSEAP
VASAPEPSTARVAPAPEPSATPVASAPEPTATPQTGWGSSPDLGAPATLVLLRHGETALT
PQKRFSGSGGTDPELSATGRDQAERAAAHFAALGTVQEIVSSPLRRCRETAAAVAARLGL
DVHVDEGLRETDFGAWEGLTFGEVRERHGDDLTAWLASPDAAPTGGGESFAEVAGRVAAA
RDRIVARYAGRTVLLVTHVTPIKTLVRLALGAPPEALFRMELSAASISTVAYYGDGNASV
RLLNDTSHLR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcccgccaggtggtggtcgaggccgacggcggctcccggggcaacccgggg
cccgccggctacggcgcggtcgtcatcgacccggccaccggcgaaccgctcgccgaggcc
gccgagtacatcggcgtcgcgacgaacaacgtggccgagtaccggggcctgatcgccggc
ctgaccgccgcgaaggcgctgttcccggacgccggggacgcgctgcgggtccacgtccgg
atggactccaagctcgtggtcgagcagatgtcggggcgctggaagatcaagcaccccgac
atgaagccgctggcggcccgggccgccgcgatcctgccgccgtcctccgtgacgtacgag
tggatcccgcgcgcgcagaacaagcacgcggaccggctcgccaacgaggcgatggacgcg
ggccgcgacggccgcacgtgggaggcgtccgcctcgaccgccgccctggacaccccgagc
gcccgcaccgcgagtgcgccgccgcccgtccaggggccgcccggcgaccaggcggcgggc
gccgccagggcccgtgccgcactggcggcggcccgtggcgcggcggcccccgaagggctc
ttcccgatgccgggcgcgcaggagccggagccgccggttgaggcagcgccggtcaccggg
gcggccgcaccggccgctgagccgtccgccgcaccgggcgctgagccgtccgaagccccg
gtcgcatcggccccggagccgtccacagctcgggtcgcaccggccccggagccgtcagcc
accccggtcgcatcggccccggagccgaccgccaccccgcagaccggctggggctcgtcc
cccgacctcggggcccccgccacgctcgtcctgctccggcacggcgagaccgccctcacg
ccgcagaagcggttctccggcagcggcggcaccgaccccgaactgtcggccaccggccgt
gaccaggccgaacgggccgccgcgcacttcgccgccctgggcaccgtccaggagatcgtc
agctccccgctgcgccgctgccgcgagaccgccgccgccgtcgccgcccggctcggcctg
gacgtccacgtggacgagggcctgcgcgagacggacttcggcgcgtgggagggcctgacc
ttcggggaggtgcgggagcgccacggcgacgacctcaccgcctggctggcttccccggac
gccgctccgaccggcggcggcgagagcttcgcggaggtggccgggcgggtcgccgccgcc
cgggaccggatcgtcgcccggtacgcgggccgcacggtcctcctcgtcacccacgtgacc
ccgatcaagacgctcgtccggctcgccctgggcgctccgcccgaggcgctgttccggatg
gagctgtcggcggcctcgatctccaccgtcgcgtactacggcgacggcaacgcctccgta
cgcctgctcaacgacacctcgcacctgcgttag
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