Struthio camelus australis (South African ostrich): 104138209
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Entry
104138209 CDS
T08512
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104138209 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scam03400
]
104138209 (LIG4)
Enzymes [BR:
scam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104138209 (LIG4)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104138209 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
104138209
NCBI-ProteinID:
XP_009663989
Ensembl:
ENSSCUG00000002240
UniProt:
A0A093HAQ9
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MASTPASQPSPKKTVASQVPFADLCCTLERMQTCKSRPEKTKYFKEFLDSWRRFHDALHQ
KEKDVTDSFHPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLHYRTP
AGSRGDAGDFAMIAYFVLKPRCPKQGRLTIEQVNELLDAIANNNAAKNKGLLKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELYNVTTDLEKVCRQLHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNHIFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGSSPLEGSLTPFIHKAFKNNVQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EESDLQTCYCVFDVLMLNDQKLGHEALSKRYEILSDVFTPVTGRMHAVHKTSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVTGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPSIFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEVYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEHLRSKAEGKLASKHLPIDDDDEPQEKKKKTVPKVKKIIGIAEQFKAPDLSNINKV
SNVFEDVEFCVMTGTGRYSKSELESKIAECGGSVVQNPGPDTYCVIVGTENVRVKNIIAS
NKYDVVKAEWLLQCFQTKMLVPWQPAFMIHMCPDTKEHFAREYDSYGDSYTADTDVAQLK
EVFSRMKDNSKMMPLDMIAVLEERYSWNSCQLSMFRGNTIYVDCYVVVNEPRTKIHGTRL
SVRALELRFYGAKVVPHLEEGVSHVIIGEDHSRVKEMKALRRTFGKKFKIVSELWVTDSV
EEGFPKNENQYLI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacacctgcttctcagccttctcctaaaaaaacagtagcctctcaggtgcct
tttgcagatctatgctgtactcttgagcgaatgcagacatgtaaatctcggccagagaaa
accaagtatttcaaggagttcctggattcctggaggaggttccatgatgcccttcatcaa
aaggagaaagatgtcacagattcttttcacccagcaatgcgacttattcttccgcaattg
gaaagagaaaggatggcatatggaattaaagaaactatgcttgcaaaactgtatattgaa
ctgcttaatttaccaaaagatgggaaagatgccgcaaagcttttacattacagaacacct
gctggctcacgtggagatgctggagattttgcaatgattgcgtactttgtgctaaagcct
aggtgcccaaaacaaggcagactgacaatagaacaggtcaatgaacttttagatgcaata
gctaataataatgctgccaaaaacaagggtctgttaaagaaaagcctccttcagttaatt
actcagagctcagcacttgaacaaaaatggcttatccggatgattataaaggatctgaaa
cttggtgttagtcagcaaactatattttccatttttcatcctgatgctgctgaattatac
aatgtcacaactgatttggaaaaagtttgtagacaactgcatgatcccactgtctcgctt
agtgatgtttctatcatgttattttctgcctttaaaccaatgcttgctgctattgctgat
gtccagcaaattgagaaacaaatgaataatcatatattctacatagaaactaaactggat
ggtgagcgtatgcagatgcacaaagatggagatgtatataaatatttttccagaaatggg
tatgactatactcagcagtttggttcttcaccccttgaaggttcgttgactccatttatt
cataaagcatttaaaaacaatgtacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgaaacacaaacattcatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaagaatctgatctgcagacctgctactgtgtgtttgatgtattaatgcttaatgatcag
aagttgggccatgaagcactaagcaaaagatacgagatcctaagtgacgtatttacccca
gtaacaggcagaatgcatgctgtacataaaacaagcgccagaactagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaaggaattatggtgaaagatcccatg
tccacttacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatacgtc
actgggctgatggatgagctagaccttttgattgttggtggttactggggaaaggggtca
cgtggtggaatgatgtctcattttttgtgcgctattgcggagactccacctccaaatgaa
aaacctagtattttccactcgatttgtcgtgttggctctggttatactatgaaggaattg
tatgatttaggtttgaaactggctaaacactggaagccctaccataggaaggaccctcca
tgcaacattttgtgtggaactgaaaaacctgaagtgtacattgaaccttgtaactctgta
atagttcagattaaggcagctgagattgttaacagtgatatgtataaaactgactgtact
ttgagattcccccgaattgagaaaataagagaggacaaggaatggtatgaatgcatgact
tcagacatgttagaacatctcagaagcaaagcggaaggaaagctggcctctaagcacctt
ccaatagatgatgatgatgagccacaagagaaaaaaaagaaaactgtacctaaggtgaag
aagataattggaatagctgagcagtttaaagcccctgatctttctaatataaacaaagtt
tcaaatgtatttgaagatgttgaattctgtgttatgacaggaacaggaagatactcgaag
tctgaattagaaagcaaaatagctgaatgtggtggcagtgtggtacagaaccctggacca
gacacgtactgtgtcattgtaggaactgagaatgtcagagtgaaaaacatcattgcttcc
aacaagtatgatgtggtgaaggcagagtggcttctccagtgttttcaaaccaaaatgctt
gtaccttggcagcctgcctttatgattcacatgtgtcctgacacaaaagaacattttgct
cgtgagtatgactcttatggagacagctatacagcagatacagatgttgcacaactaaag
gaagtgttctcaagaatgaaagataatagtaagatgatgccattggacatgattgctgta
ttagaagaacgttattcatggaacagctgccagctcagtatgttcagaggaaacactatt
tatgtggactgttacgttgttgttaatgagcctagaacaaaaatccatggaacaagatta
tcagttagagctttggagctccgattttatggtgcaaaagtagtccctcacctagaagag
ggtgtgtcccatgtcattataggagaagatcactcccgggtaaaagagatgaaagcactg
aggagaacatttggtaaaaaatttaaaattgtgtctgagctgtgggtaactgattcagtg
gaggaaggattcccaaagaatgaaaatcaatacttaatttaa
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integrated database retrieval system
