Struthio camelus australis (South African ostrich): 104139540
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Entry
104139540 CDS
T08512
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam00310
Lysine degradation
scam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104139540 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104139540 (SETDB1)
Enzymes [BR:
scam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
104139540 (SETDB1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104139540 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104139540 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
Phage_TTP_16
DUF4537
DNAPKcs_CC5
WHD_PARP12
Motif
Other DBs
NCBI-GeneID:
104139540
NCBI-ProteinID:
XP_009666021
Ensembl:
ENSSCUG00000004548
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVA
HVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKATEVIEIPDEDDDDVM
SIDSGWKHSDTSPRIAKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDTQKDGQTPQ
HTPGTLQSVGSAAAGSDLSNDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDRNQVWLYAGIVAETPNVKNKDRFL
IFFDDGYASYVKEWELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQS
GQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSVSPQPAEMEGSDS
QLAQSRKQVAKKSTSFRPGSVGSGQSSPASPVLSDTPPAGRTGTSQQHRLSSGQAGTGTA
QAFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDF
RRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDR
KFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVG
CDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCN
INMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLE
MGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDEEEENTGTEEQEESNEDSSDD
NFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDETTVAASCKLPV
SEETSKNKVASWLSSNSMADSFQDNDSASSFKMSEGGEAKACKTELPGEREKASTSGLGD
VDGESKVSKKDDPEDPNKLPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPL
QPSTDDVLTLSSSTDSEGENGQAAGGQAPGTTNDSDDIQTISSGSEEEEVDDKKNPSSGS
GPVKRQVAVKSTRGFALKSTHGIAIKSTNMAAADKGESAPVRRTTRQFYDGEESCYIIDA
KLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSV
EGKELLCCCGAIECRGRLL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggagatcaaagagctacaacaagaagttatggaggagctaggtatctcc
atggaggagctccaggacatcattgacgaagagctggagaagtttgagtgtgtgaagcag
aggaagcagcagctggaggagctggagaagtgcgtgaagcagaaggaagaggaggtggct
cacgtcgaccggctctttgatgatgcttcaagagccattgataaatgtgagatattagta
aaagatctgtactccaagctgggcctccagtatcgtgagagcagttctgaggacgaggac
ttggctgctaaggccacagaagtgatcgagatcccagatgaggacgatgatgatgtcatg
agcattgactcgggctggaagcacagtgatactagtcccagaattgcaaaggatcagact
ctgctacgggaagccatggctgcaatgagaaagtctgcccaagatgttcagaaatttatg
gatgctgtgaacaagaaaacaaatgcccaggatacacaaaaagatggacagacccctcag
catactcctggcactctccagtccgtgggctctgctgctgctgggagcgacctcagcaac
gacggtgacctgaaggttggcatgaggatcttgggcaagaagagaaccaagacatggcac
aaagggacactgatagccatccagacggtcggtgctggtaagaagtataaagtgaaattt
gacaataaagggaagagtttgctctctggcaatcacattgcttacgactatcacccctca
cctgagaaacactatgttgggagcagggttgtggcaaaatacaaagataggaatcaggtt
tggctgtacgctggcattgtggctgaaaccccaaacgtaaagaataaagacaggttcctg
atcttctttgatgatggctatgcttcgtacgtcaaggagtgggagctgtacccaatctgc
aggccacttaagaagacttgggaagatatagaggatgtgtcctgtcgcgatttcattgag
gagtacatcacagcctaccccaaccgtcccatggtgctgctgaagaatggccagctgatc
aaaacggagtgggaagggacctggtggaaatccagagtggaagaagtggatggcagtctg
gtcaaaatcctcttcctggatgacaaacgctgtgagtggatttaccggggttctacacgc
ctcgagcccatgttcagcatgaaaacctccacagcctccacccaagaaaagaagcaaagt
ggacaagcgaggactcgtcctaatgtcggtgctgtcagaagcaaagggcctgtagtacaa
tatacgcaagatttaacaggagctggtactcagtacaaacctctagagcaaatgcaagca
gcctcgctggctgcacggtccgtttctccacaacctgctgagatggaaggctccgacagc
cagctggcccagtctagaaagcaagtggccaagaagagcacttccttccgtcctggctcc
gtgggctctgggcagtcctcgcctgcttcgcctgtcctaagcgatacgccgcctgcggga
aggactggcacatcccagcagcatcggttgtccagtggccaggcgggcacaggcacagca
caagccttccacggcatgatggaccgtgtccccaacgagccctcgtaccgagccccgctg
gagaagctcttctatctgccgcatgtctgcagctacacctgcttgtcccgtgtccgcccc
atccgcagcgatcagtaccgcagcaagaaccccctgctcatcccactgctctatgacttc
cgacggatgacagcccgccgacgggttaaccgcaagatgggcttccatgtcatctacaag
acaccatgcgggctgtgcctgcgaaccatgcaggagattgaacgctacctttttgagaca
gactgcgacttccttttcctggaaatgttctgcctggacccctacgtgctggtggatcgc
aagttccagccctacaaaccctactactacatcgcggacattaccaagggcagggaggac
gttcccctgtcctgcgtcaatgagatcgataacaccccgcctccgcaggtggcctacagc
aaagagcgcatcccaggcaaaggggtttacatcaacaccagctgggagttcctcgtgggc
tgcgactgtaaagacggctgcagagacaaatcaaagtgtgcttgtcaccagctgacggtc
caggcgactggctgcaccccaggtgggcagatcaaccccaattcagggtaccagcacaaa
aggctggaagaatgcctcccaacaggagtttacgagtgtaacaagaggtgcaagtgcaac
attaacatgtgcaccaatcgcttggtccaacatgggctccaagttcggctgcagttattc
aagacgcaaaacaaaggctggggcattcgctgccttgatgatattgccaaaggctctttt
gtctgcatctatgcagggaaaatcctcactgatgactttgctgacaaagaggggttagag
atgggcgatgaatactttgcgaacctggatcacattgagagcgtggagaacttcaaggag
ggctatgagagcgatgcaaagtgctcttctgacagcagtggggtggacctcaaggatgaa
gaggaggagaacacaggcactgaggagcaggaggagtccaatgaggacagctccgatgac
aatttctgcaaggatgaggacttcagcaccagctcggtgtggcgcagctacgccacgcga
cggcagacccggggccagaaggagaatgggctgtcggagacagcctccaaggactctggg
ctcacccggcaaatcagccacgatgagacaacggtggctgcctcctgtaagctgccagtg
tctgaggaaacctccaagaacaaagtggcctcgtggctgagctccaacagcatggctgac
agcttccaggacaacgacagtgcctcctccttcaagatgagtgaaggtggtgaagccaag
gcctgcaaaacagaactgcctggtgagagagagaaagcctccacttctggcctgggtgac
gtggatggagagtcaaaggtgtcgaagaaagatgaccctgaagacccaaacaaacttccc
gggctaagtgacttgggaaggatgtatggctacaatccgagcccacccaaactggaaggg
atccggaggccgacgagcaaaactgccctgctccagagcagacggcactctgtccccctg
cagccctccacggatgacgtgctgaccctgtcgagcagcacagacagcgagggggagaat
gggcaggcagcaggagggcaggccccaggcaccaccaatgacagtgatgacatccagacc
atttcttcgggctctgaggaggaggaagtggatgacaagaaaaacccctcatctggctca
ggtcccgttaagaggcaggtggcggtgaaatccaccagaggctttgccctgaaatcaact
cacgggatcgccatcaagtcgactaacatggcagcagccgacaagggtgagagtgctcct
gtccgcaggaccactcgccagttctacgatggagaggagtcctgttacatcattgatgcc
aaactggaggggaacctgggccggtaccttaaccatagctgcagtccaaacctcttcgtg
cagaacgtttttgtggacacacatgacctccgtttcccttgggtcgccttctttgctagc
aagaggatacgagccggcacggagctgacgtgggattacaactatgaagtgggcagtgtg
gaaggcaaagagctgctgtgctgctgcggggctatcgagtgccgagggcggctgctgtga
DBGET
integrated database retrieval system
