Struthio camelus australis (South African ostrich): 104140229
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Entry
104140229 CDS
T08512
Symbol
THBS1
Name
(RefSeq) thrombospondin-1 isoform X1
KO
K16857
thrombospondin 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04115
p53 signaling pathway
scam04145
Phagosome
scam04148
Efferocytosis
scam04350
TGF-beta signaling pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104140229 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104140229 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104140229 (THBS1)
04148 Efferocytosis
104140229 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
104140229 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104140229 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104140229 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104140229 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104140229 (THBS1)
Membrane trafficking [BR:
scam04131
]
Endocytosis
Phagocytosis
Opsonins
104140229 (THBS1)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104140229 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104140229
NCBI-ProteinID:
XP_009667129
Ensembl:
ENSSCUG00000006376
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MGPAAVLFLLLMLSVSEAKRAAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES
SSPAYRIEDASRIPAVPDDKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLAVEQKDGSG
HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGIFHKNKEEWTIDSCTECTCQNSATICQKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGVITRIRLCNSPVPQLNGKPC
EGEARETKSCQKDPCPINGNWGQWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE
AKGTQVCNKQDCPVDGCLSNPCFAGTTCTSFPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDSIPDDRDNCPFIYNPQQYDYDKDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDLDGVGDQCD
NCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISE
TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRGNEDTLLM
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcggctgttctcttcctcctccttatgctcagtgtctctgaggccaagcgg
gcggcagagtcaaggggagatgacaacagcgtgtttgatctctttgaactcatcggcttt
attcgcaagggagctgggcgccgggcaccaggagtgcacctggtaaagggaccagagtct
tccagccctgcttaccgtattgaagatgccagtcgcatcccagctgtccctgacgacaag
ttccaagacttattagatgccatccatgctgagaagggcttcatccttctggccactctc
cggcaagccaagaagagtagaggcacactgctggctgtggaacagaaagatggctctggt
catgtcttcagtctggtatccaatggcaaggcaggcaccctggacctgagcctttctggt
gatggcaagcaacagctagtgtcagtagaggatgccttgctagctacaggacactggaag
aatatcaccctgtttgtgcaggaggaccgggctcagctctatgtggggtgtgagaagatg
gagaatgctgaactcgacatccccatccagaacatcttcactagggatctggccagcagt
gccaggctccgtattgccaaaggaggagtcaacgacaacttccagggactgctgcagaat
gtgcggtttgtgtttggaacaactctggaaactattctgaggaacaaaggctgctccagc
tccactagtgcaatcattacattggacaaccctatcaatggctcaagcccagctatccgc
actaattacattggtcataaaacaaaggacatccaagcagtctgtggtttttcctgtgat
gaactaacaaacatgttcgtggaactgcaagggctacggtccatggttacaacacttcaa
gacagagtgcgcaaagtgactgaggaaaatgaactgattgctaaagtggtccagattact
cctggagtatgcattcacaatggaatcttccacaaaaataaagaagagtggactattgac
agctgcaccgaatgtacttgccagaactctgccactatatgccagaaggtgtcatgccct
ctaatgccttgttccaatgccactgttcctgatggggagtgctgccctcgatgctggcct
agcgactacgctgatgatggatggtctccttggtctgaatggacatcgtgttctgtgact
tgtgggaatgggattcaacagagagggcgctcctgtgacagtctcaataaccgctgtgaa
ggatcttctgtacagactcggacttgccaccttcaggagtgcgataagaggtttaaacag
gatggtggctggagccactggtcaccatggtcatcatgttctgtcacttgtggcacgggt
gtgatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgt
gagggtgaggcaagagaaaccaaatcctgccagaaagatccttgcccaattaatggcaac
tggggacagtggtctccatgggatgcttgcacagtcacatgtggtggaggacttcaaaaa
cgtagtcgtctctgcaataatcctgagcctcagtatggcgggaagacttgcgtgggtgag
gctaaagggactcaggtctgcaacaaacaggactgcccagttgatgggtgtctgtctaat
ccctgctttgcgggaactacatgtaccagcttccctgatggctcctggaagtgtggtgcc
tgtcctgctggctaccacggtgatggtgtccactgccaagatattgatgagtgtaaagag
gttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacctggg
tacaactgtctgccttgtccaccacgtttcacggggacgcagccatttggccgcagcgtt
gaggatgccatggctaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca
catgattgcaacaagaatgccaaatgcaattaccttggccacttcagcgaccctatgtat
cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagacactgac
ttggatggatggccaaatgagaaccttgtctgtgttgccaatgccacttaccactgtaaa
aaagacaactgtcccaatctgccaaattctgggcaggaagactacgataaggatgggatt
ggtgatgcctgtgacaatgatgatgataatgacagtattcctgatgatcgggacaactgt
ccattcatctacaacccacagcagtatgactatgacaaggatgacgttggtgaccgctgt
gataactgcccctacaatcacaaccctgatcagactgacactgacaacaatggagaagga
gatgcatgtgcagtagatattgatggagatggtgtccttaatgaaatggacaactgccag
tatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgtgat
aactgtccactagaacacaatcctgaccaggaggatactgactctgaccgcataggtgac
gaatgtgacaacaaccaggacatagatgaagatggtcatcaaaataaccttgataactgc
ccctatgtgcccaatgctaatcaagctgaccatgataaggatggaaaaggtgatgcctgt
gaccatgatgatgacaatgatggtatccctgatgacaaagataactgccgactggttgcc
aacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgacttt
gaccaagacagcgtgccagatattgatgacatctgccctgaaaatgtggacattagtgag
actgacttccgacgatttcagatgattcccctggatcccaagggaacatcccaaaatgat
cccaactgggtggttcgtcaccagggtaaagaactggttcagacagtcaactgtgatcct
ggacttgctgtgggttttgatgaattcaatgctgtggacttcagtggcacgttcttcatc
aacacagaaagggatgatgattatgctggctttgtatttggctaccaatcgagcagtcgt
ttctacgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacaaaa
gctcaaggctactcaggtctctccatcaaagttgtgaattccaccacaggtccaggagaa
catcttcgtaatgctctatggcacacaggaaacacccctggccaggtgagaactctgtgg
catgaccctcgtcacataggctggaaagacttcacagcatacagatggcgtctgagccat
agaccaaagactggctacatcagagttgtaatgtatgaagggaagaaaatcatggcagac
tcgggaccaatctatgataaaacctatgctggtggtcgactaggattatttgtcttctct
caagaaatggtgttcttctcggatcttaaatatgaatgcagaggtaacgaggacactttg
ttgatgtga
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integrated database retrieval system
