Struthio camelus australis (South African ostrich): 104141229
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Entry
104141229 CDS
T08512
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03440
Homologous recombination
scam03460
Fanconi anemia pathway
scam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104141229 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104141229 (BRCA1)
03460 Fanconi anemia pathway
104141229 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scam01009
]
104141229 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104141229 (BRCA1)
03036 Chromosome and associated proteins [BR:
scam03036
]
104141229 (BRCA1)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104141229 (BRCA1)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104141229 (BRCA1)
Protein phosphatases and associated proteins [BR:
scam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104141229 (BRCA1)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104141229 (BRCA1)
Multi subunit type E3
BRCC complex
104141229 (BRCA1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104141229 (BRCA1)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104141229 (BRCA1)
BRCA1-A complex
104141229 (BRCA1)
BRCA1-B complex
104141229 (BRCA1)
BRCA1-C complex
104141229 (BRCA1)
BRCA complex
104141229 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104141229 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
BRCT_2
BRCT_3
Motif
Other DBs
NCBI-GeneID:
104141229
NCBI-ProteinID:
XP_009668742
Ensembl:
ENSSCUG00000007307
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MFKLLSKKKKGVIQCPLCKTEVTKRSLQENSRFKQLIEGLLETIYAFELDTGVKFLNSHQ
FPKTSIEANAAELLCKESSIIQSKGFRNRKKKAKENGQENCTLEANADTQLTDTRVKRCP
LRNKNQKCSSDTGIYIEFGSDSSEDLFKQASNTGRLGDKDVLQFSSQEKLEELKSSEKGN
ECSCNIQPVKLGAKEIILPNVIGESDSLKEGLSKKSTQNIAEHAKPGQVNVTECQSSPLN
VLAADLLAEQCDTVGNASPLRKEDTTFFENAEEMDAEQTQCNSKSKEFKLEDSSESKLDK
SKQIHTVMQCVEDVEMCEPENDSFPEEEPPLEKPETLHSDALNQVSRKRLKRSIQKVNEW
FSKSNEILSSNSSQDDPAEATDTSGEGDVRLSDNDSCISEKTNLMVNCMEIAVVEKTKKS
SRPTADSIKDKIFGKTYKRERKSNPPIILREILPTAKSEDVAADEKCLNNSRMDKLKQKR
KTACVLQPEDFIKKKDLEEADGCPQSVNWCLGEAEKKKHDESSAVNESSVTEEREDNTLA
ELGEGESIWKNAPEEVPGKSDGVLEPNNCDQKSTKKPSSLAKRCRHSTRTMHALQLVVGR
NSGSPDPAEPQIDSYPSSEEPRKVDSERRQVRRSRRLQLLAEEMTKETGKRSVLTEGARK
YDSGSGGSFSGVQRNVLVHTSECKDLGEQQDILSYRPATNLKSADLEADEMQVSLKNSSD
TADTGKSLFNPTSSCQHSNFGSVVPDSCCTSQESEMLGSPFLLQPPSVNVVQTASRVTKE
KTTESCTTFPKNNGHHTKNVPEDFRNEKSPVSKNVLELTKEAEDSELDTQYLRNIFRHSK
RLSFTLYPSPMKARVVEDAASETLKMSCADHVEDKHSKCLKTENLQGEKTNSEYLSRFCE
KEKLKACESACVSPVSCFISNTERVHTGEHQENVSQVADRGNLTSPRGIGATGVENKNQQ
QKREQANDKTVSADIVIESELSQNPFKSNRSQSDQSSIEERVFQRINTGNEIGSSSESNQ
AEKAEVDEGKGPILHFQPTSMVCPTVCQQNPPEFNCKVKQKKNSTRERQRAKSNEEQTTQ
TVSTGMPECLISEALEQSLKGSTDFPGLSETPDGLLCSDDDIEENPSFCETDRKERSAVF
VKRSDSALVKELDGRSANSTPISQDIRRSRRRVRKLQSSEEESSEDENLPCFQTLIFGKP
ASSTPLQFNKQVTSMVGSSVNPCTLPHSGSHNDRSMQKTPEAALNTGCVSPSQESECSVN
LFSSQSNMSEESVDGAQELKKPLIPILASKQMSNQNESKETFQSCNRGLKKRKTNLQDEY
HEDPNIGANLGEASGYDSETSHVEDSSGPFSQGEILTTQQKNAMQKNLKKLQQEMAVLEA
VLNQHESQDSEFLLVGKELPHSNSEGTLGMEQIRQVRAIESTSEVNFANQKCSSSKGFSP
DDFRVKSSDSSNSKIKELEERSPVLLLPSPKSYLLKRPDLKKGLQRDSVLKNKAASQEKK
TLQECSQCQLEPENAADEKSGTKLNSASVLSNLSGNVSRSPNSSSSSVRLLHPQTAEATN
SSAVAQKANGSCTQGCKHERTVCFPTSVLHNTAGKENATSPVVTNRREMSIVASGLNQSE
HLMVQKFARKTRSTLSNHITEGTTHVIMKTDTELVCERTLKYFLGIAGRKWVVSYQWVIQ
SFKEGRILDEDNFEVRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLE
WMVELCGASVVKQLHLFTHKINSTAVVVVQPDAWMENRGYRVIQQKSNVAVVTREWVLDS
VACYERQEFDAYLLS
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactcctcagcaaaaagaaaaaaggtgtgatacagtgtcctctgtgcaagact
gaagttaccaaaagaagtcttcaggaaaattccagatttaagcaactaattgaaggactg
ttggaaactatctatgcttttgagcttgacacaggagtgaagtttctaaacagtcatcag
tttcctaaaacatccatagaagctaatgctgctgagctcctgtgtaaagaaagttctatt
atccaaagtaagggtttcagaaacaggaaaaaaaaagctaaagaaaatggacaagaaaat
tgcaccttggaagctaatgcggatacacaacttacagataccagagtcaaaaggtgtccc
ttgagaaacaaaaaccagaaatgttcctctgatacagggatatacatagagtttggctcg
gattcatctgaagatcttttcaaacaggcaagcaatactggcaggttaggagacaaagac
gtgcttcagttttcatctcaagaaaagctagaagaacttaagagttctgagaaggggaat
gaatgttcttgcaatatacagcctgtcaagctgggtgccaaagaaataattctaccaaat
gtcataggtgaaagtgattccttaaaggaaggtttgagcaagaaaagcactcagaacatc
gctgaacatgccaaacctggccaagtaaacgtgactgaatgccagagttctcctttaaat
gttcttgctgcagatttactcgcagagcagtgtgacacagtgggcaatgccagcccctta
aggaaagaggatacaactttctttgaaaacgcagaagaaatggatgcagagcaaactcag
tgcaatagtaaaagcaaagagtttaagttggaagatagctcagagagcaagttggacaaa
agcaagcaaatacatactgttatgcaatgtgtggaagatgtggaaatgtgtgaacctgag
aacgattcttttcctgaagaagaacctcctctggagaagccagagacacttcacagtgat
gccctgaatcaagtttctaggaagagactgaagcgaagcattcagaaagtcaatgaatgg
ttttcaaaaagcaatgagattctatcttccaattcttcccaggatgatcccgctgaagca
actgatacttcaggtgaaggagatgtgcgcttatcagataacgattcctgtatttcagag
aagactaaccttatggtaaattgcatggaaattgcagttgttgaaaaaaccaagaaatca
tcaagaccaacagcagatagcatcaaagacaaaatatttggaaaaacatacaagagagag
aggaagtcaaatccccctattatcttgagagagattttacctactgcaaaaagtgaagat
gtggccgctgatgaaaagtgcttgaataattccagaatggataaactaaaacaaaaaagg
aagactgcctgtgtcctgcaacctgaggacttcatcaagaaaaaagatctggaagaggca
gatgggtgccctcagagtgttaactggtgccttggagaggctgaaaagaaaaaacatgat
gagagttctgctgttaatgagagttctgtgactgaggaaagggaggataataccctagca
gaacttggggaaggagagtccatatggaaaaatgctcctgaagaggtgcctggcaaatct
gatggagtgctagaaccgaataactgtgatcagaagagcactaaaaaaccaagttcttta
gcaaaaagatgcagacattcaactagaactatgcatgctctacagttagtagtgggtaga
aactcaggctcccctgatccagctgagccacagattgatagctatccaagcagtgaagag
ccaagaaaagttgattctgagcgcagacaagtcaggcgcagcagaaggcttcagttactt
gctgaagaaatgacaaaagaaacaggaaaaagaagtgtactaactgaaggagcaagaaaa
tatgacagtggaagtggagggtctttctcaggagtgcaaaggaatgtgttggttcatact
tctgaatgcaaagacctgggtgagcagcaggatatactgagttataggccagccactaat
ctgaagagtgctgatctggaagctgatgaaatgcaggttagtctaaagaattcatctgac
actgcagacactggaaaaagtctcttcaatcctacatcttcatgtcagcattcaaatttt
ggttctgttgtacctgatagttgttgtacctctcaagaaagtgaaatgctaggtagccct
ttcctccttcagcctccttcagtgaatgttgtgcaaactgcttctcgagtgaccaaagag
aagacaactgaatcatgtactacttttcccaagaacaacggacatcatacaaaaaatgtt
ccagaggactttagaaatgaaaagtccccagtgtctaaaaatgttttggaactcaccaag
gaagctgaagatagtgaattagacacacagtatctgcgaaatatatttaggcattcaaaa
cgactatcatttaccctttatcctagtcccatgaaggcacgtgtagtagaagatgctgct
tctgaaaccttaaagatgtcatgtgctgatcatgtagaagataagcatagcaaatgttta
aaaactgaaaacttgcaaggagagaaaacaaattctgaatatttgagtaggttttgtgag
aaagaaaagcttaaggcctgtgaatctgcttgtgttagccctgtgtcttgctttatcagt
aacactgaacgtgtgcacaccggggaacatcaagaaaacgtttcacaggttgcagatcga
gggaatctgacatcaccaagaggaataggtgctactggggttgagaataaaaaccaacag
caaaaaagagagcaggcaaatgataagacagtatcagctgacatagtgatagaaagtgag
ctaagtcagaatccattcaaaagtaatagaagccaaagtgatcagagtagtatagaagag
cgtgttttccaaagaataaacacaggtaatgaaataggctccagttcagaaagtaatcaa
gcggaaaaggctgaagttgatgaaggcaaaggaccaatattacattttcagcccacatca
atggtttgtcctacagtttgtcagcaaaatcctcctgaatttaactgcaaagtcaagcaa
aagaaaaatagcacaagagaaagacaacgagcaaagagcaacgaagaacaaacaacccaa
actgtcagcacagggatgcctgagtgtttaatttcagaggctctagaacagtctcttaaa
ggcagtactgattttccagggctgtctgaaacccctgatggcttactgtgctctgatgat
gatattgaagagaaccccagcttttgtgaaactgataggaaagagagatctgctgtgttc
gttaaaagaagtgacagtgccctggtaaaagaactggatggtagaagtgctaattctacg
cctatatctcaagatattcggagatctcgaagaagagtgcggaaactgcaatcttcagag
gaagaatctagtgaggatgaaaatttaccatgttttcagacgttaatatttggcaaacca
gcaagcagcactcctttgcagttcaataaacaggtgacatctatggtagggtcttcagta
aatccctgcacattgcctcacagtggaagtcataatgaccgtagcatgcagaaaacgcct
gaagctgctctaaatactgggtgtgtttctccaagccaggagtcagaatgttctgttaat
ttattttcttcccagtccaacatgtctgaagagtcagttgatggagcacaggaactgaag
aaacctttaataccaattcttgcatccaaacaaatgagcaatcagaatgaaagtaaagaa
acttttcaaagttgtaatagagggctgaagaaaagaaaaactaacttgcaagatgaatac
cacgaagacccaaacataggagcaaacctaggtgaagcatctggatatgatagtgaaaca
agtcacgtagaggattcatctgggccattctctcagggtgaaatccttactacacagcag
aagaatgctatgcaaaagaacttaaaaaaacttcaacaagaaatggctgtacttgaagca
gtgctaaaccagcatgaaagtcaggactctgaatttttactggtaggtaaggaactccca
cattccaatagtgaaggaacacttggaatggaacagataagacaagtaagagcgatagag
tcaacctcagaagtaaattttgcaaatcagaaatgcagcagttcaaagggattttcacct
gatgatttccgtgtaaagtcgagtgattcttccaacagtaaaatcaaagagctagaagaa
aggtctccagtactattgcttccctctcctaaatcttatttgttaaagagaccagatcta
aagaaaggccttcagcgtgacagtgttctgaagaacaaagctgcttctcaagagaagaaa
accctgcaagagtgtagtcagtgtcagcttgaaccagaaaatgcagctgatgagaaatct
gggaccaaactaaacagtgcatctgtcttatcaaatctcagtggaaatgtgagcaggagt
ccaaacagctcttcctcctctgtaaggcttctccaccctcaaactgcagaagcaacaaat
agttctgctgtagctcagaaagctaatggaagctgtactcaaggatgtaagcatgagaga
actgtctgttttcctacgtctgttctgcacaatacagctgggaaagaaaatgctacaagt
ccagttgtgactaacaggagagaaatgtcaattgtggcatcaggtctgaatcaaagtgaa
cacttgatggtccagaagtttgccagaaaaactcggagcactttatctaatcacattact
gaaggaacaacccatgtcataatgaaaacagatacggagctggtgtgtgaacggacattg
aagtattttctgggtattgcaggaagaaaatgggtggttagttatcagtgggtaattcag
tcttttaaagaaggacggattcttgatgaggataactttgaagttagaggagacgtgatc
aatggaagaaaccaccaaggtccaaagagggctagacaatctcttactgaaaagatcttt
aaagactttgagatctgctgctatggacctttcactgatatgactacagaacatctagaa
tggatggtggagctttgtggtgcctctgtagtgaagcaacttcatctgttcacacacaaa
ataaattctactgctgtcgtggttgtgcagccagatgcttggatggaaaatagaggctat
cgagtgatccagcaaaagagcaatgttgctgtggtgactcgagagtgggtattagacagt
gttgcttgctatgagcgccaggagttcgatgcttaccttttgtcctaa
DBGET
integrated database retrieval system
