KEGG T08512: 104142446

Struthio camelus australis (South African ostrich): 104142446

Entry

104142446         CDS       T08512

Symbol

SMNDC1

Name

(RefSeq) survival of motor neuron-related-splicing factor 30

K12839

survival of motor neuron-related-splicing factor 30

Organism

scam Struthio camelus australis (South African ostrich)

Pathway

scam03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:scam00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104142446 (SMNDC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scam03041]
    104142446 (SMNDC1)
Spliceosome [BR:scam03041]
Complex A
  U2 snRNP components
   U2 related factors
    104142446 (SMNDC1)
Complex B
    104142446 (SMNDC1)
Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104142446 (SMNDC1)

SSDB

Motif

Pfam:

SMN_Tudor TUDOR

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

Unknown

AA seq 206 aa
LKLKKDLQEVIELTKDLLSTQPSETLASSDSSASALPSHSWKVGDRCMAIWSEDGQCYEA
EIEEIDEENGTAAVTFAGYGNAEVTPLFNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREY
KKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVG
TCGIADKPMTQYQDTSKYNVRHLMPQ

NT seq 621 nt +upstreamnt +downstreamnt
ctaaaactgaagaaagacttacaggaagtcatagaattaaccaaagatctcctttcaaca
caaccttcagagactcttgccagttctgacagttctgcttctgctctgcccagccactcc
tggaaggttggggatagatgcatggcaatatggagtgaagatggacagtgctatgaagct
gaaatcgaagaaatagatgaggagaatggaacagctgcagtcacatttgctggatatggc
aatgctgaagttacacctttgttcaacctcaagcctgtggaagagggaaggaaagcaaaa
gaggacagtggcaacaaacccatgtccaaaaaagaaatgatagcccagcaacgagagtat
aaaaagaagaaagctttgaaaaaagctcagagaattaaagaacttgaacaggaacgagag
gaccagaaagtcaagtggcaacaattcaacaacagagcctactctaaaaacaaaaaaggc
caggtaaagaggagtatttttgcttcccctgagagtgtaactggcaaggttggagttgga
acatgcggaattgcagacaaacctatgacacaatatcaagatacctctaaatataatgtc
aggcatttgatgccacagtaa

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