Struthio camelus australis (South African ostrich): 104143703
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Entry
104143703 CDS
T08512
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104143703 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104143703 (TRPC6)
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104143703 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
104143703
NCBI-ProteinID:
XP_009672638
Ensembl:
ENSSCUG00000012932
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MFNDRSTSLSLEEERFLDAAEYGNIPVIRKMLEECSSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEGKRLALSPSQSELQHDDF
YAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPHDYFCKCSECNQKQKHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVEMNHNNGEHGRPSLSRLKLAIKYEVKKFVAHPNCQQ
QLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPCSKLGRIMRGPFMKFVA
HAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKTSCFSWMEMLIISWVIGMI
WSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASRAQNFVDANMKDLT
SPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLG
RTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKKNEAFTTVEESFKTLFWAIFGLSEV
KSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAK
LWFSYFEEGRTLPVPFNLVPSPKSLLYLLLRIKKWISKPFLCQKKSFQEDAEMNKKIMKR
LIKRYVLKAQIDKESDEVNEGELKEIKQDISSLRYELLEEKTQNSEDLAELIRKLGEKLS
IDSKEEESKR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaccgctcaacaagtctttctcttgaagaggagcgctttttggatgcagca
gaatatggaaatattccagtgattcgtaaaatgctggaagaatgctcctcactcaacgta
aactgtgtggactatatgggacagaacgccttgcagctggcagttgccaacgagcacttg
gagatcacagaacttctgctgaagaaggagaacctgtctcgggttggggatgccttgctt
ttggctattagcaaaggttatgttcggatagtagaagccatcctaaatcaccctgcattt
gctgaaggcaagaggcttgcattaagtcctagccagtcggagctccagcatgatgacttc
tatgcatatgatgaagacggaacacgattttcccatgatgttacaccaatcattctagct
gctcactgccacgagtacgaaattgtccacactctgctgaggaaaggggctcggatcgat
aggccacatgactatttctgcaagtgcagtgaatgcaatcagaagcaaaagcatgactct
ttcagccattctagatccagaatcaatgcctacaaaggtctggccagccctgcttatctg
tctttgtccagtgaagacccagtaatgactgccttagaactcagcaatgagctggcggtg
cttgccaacattgaaaaagaatttaagaatgattacaagaaattgtctatgcaatgcaag
gattttgtggttggactccttgatttgtgcagaaacacagaagaagtggaagcaattttg
aatggtgacgtcgagatgaatcataataacggagagcatggccgccccagccttagccgc
ttaaaacttgccattaagtacgaagtgaaaaaatttgtggcacatccaaattgccagcag
caacttctctcaatctggtatgagaatttgtcaggtttacgacaacagacgatggcagtg
aagtttctagttgttcttgctgttgctgtgggactgccattcctgtcaatggcttactgg
attgctccttgcagtaagctggggaggatcatgcgtggaccatttatgaagtttgtggcc
catgcagcctctttcaccatttttcttggtctactagtcatgaatgcagctgacagattt
gatggcaccaaactccgacccaatgaaacaacaggcaatgtaaaacagctatttaggatg
aaaacatcctgtttctcatggatggagatgctaattatttcttgggtaataggtatgata
tggtctgaatgtaaagaaatttggtctcaaggtccaaaggaatacctttttgagttatgg
aatatgcttgattttggtatgttagcaatttttgcagcatcattcatagcaaggtttatg
gcgttttggcatgcttccagagcccagaactttgttgatgcaaatatgaaagatctgaca
agtcccacactggagcccaacataaaatactacactttggccagaataaactgggatccg
tctgatcctcagatcatatctgaaggcctgtatgcaattgcagtagtattaagtttctcc
agaatagcctacatcctgccagctaatgaaagctttggacccctgcagatatcgcttggc
agaactgtgaaagacatcttcaagttcatggtcatatttatcatggtatttgtggctttc
atgatagggatgtttaatctctattcctactatctgggagcaaaaaaaaatgaagcattc
acaactgttgaagaaagtttcaagacgttgttctgggctatatttggactctcagaagtt
aaatcagttgtcatcaattataaacacaaatttattgaaaatatcggttatgtcctttat
ggagtctataatgttactatggtcattgtcttactgaacatgctcatcgcaatgatcaac
agttcattccaggaaattgaggatgatgctgatgtagagtggaaatttgcaagggctaaa
ctttggttttcttacttcgaagaagggaggactcttcctgtacccttcaacttagtgcca
agcccaaaatctttgctgtacctcttactaagaatcaaaaaatggatctctaaaccattt
ctgtgccaaaagaaaagttttcaggaggatgcagagatgaacaagaaaataatgaagcgt
ctcattaaaagatacgtactgaaagctcagatagataaagaaagtgatgaagtcaatgaa
ggtgaactgaaggaaattaaacaggacatctcgagtctccgttatgaactccttgaagaa
aaaactcaaaattcagaagacctggcagagcttataaggaagcttggggaaaaactgtcg
attgactctaaggaagaagaaagcaagagatag
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