Struthio camelus australis (South African ostrich): 104147357
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Entry
104147357 CDS
T08512
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104147357 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scam03400
]
104147357 (TDG)
Enzymes [BR:
scam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104147357 (TDG)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104147357 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104147357
NCBI-ProteinID:
XP_009678291
Ensembl:
ENSSCUG00000009556
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MPALTEIGDYRLLGPSLNFEIVDELSFFFFSAFLRYYSHLQQIQAFYTFPFHPMMTAVPN
MEAVTEQPTLEDVPEPNLAQEPTKEVAKGGRKRKAKATEPKQPKKPAAKKEKSAKSKGKQ
EKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHYPGP
GNHFWKCLFMSGLSNEQLNHMDDHTLPYKYGIGFTNMVERTTPGSKDLSSKEFREGGRIL
VQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYVMPSSSAR
CAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYD
PGYEAAYGGAYCDRTIYENEQCNFSSNEAAASNPQYCEGSSFSEVPNGQWMAQSFADQIP
EFNTGMTQEQEGSSA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccagccttgacagagattggtgattacagactacttggtccatcactgaatttcgaa
attgtggatgaattgtcttttttttttttttccgcctttctaagatattactcgcatctt
cagcaaattcaagccttttatacgtttccgttccatccaatgatgactgcagtgcccaac
atggaagccgtgactgagcagcccactctagaggacgttccagagccaaacttggctcag
gaacctactaaagaagttgcaaaaggaggaaggaaaagaaaagccaaagcaactgagcca
aagcaacccaaaaaacctgctgctaaaaaagaaaaatcagccaagtcaaaaggcaaacaa
gaaaaaatcacagatacttttaaagtcaaaagaaaagtggaccgttttaatggcgtatct
gaagcggaacttcttaccaagactttacctgatattttgacctttgatctggatattgta
ataattggcataaaccctggcttgatggcagcttacaaaggacatcattatcctggacct
ggaaaccatttttggaagtgtctcttcatgtctggtttaagtaatgaacagctgaaccat
atggatgaccacaccttaccgtataaatatggaattggatttacgaacatggtggaaagg
acaacacctggaagcaaagacctctccagcaaagagtttcgggaaggagggcgaattctg
gtgcagaaattgcaaaagtataaacctcgtatagcagcttttaatggaaaatgtatttat
gagattttcagtaaagaagtttttggaataaaagttaaaaatttggaatttggattgcag
ccccacaaggtgccagatacagaaactctctgctatgttatgccatcatccagtgcaaga
tgtgctcagtttcctcgtgcccaagataaagttcattattacataaagctgaaagaccta
agggatcaactgaagggcattgcaccaaacacagacgtgcaagaggtgcagtacacgttt
gacttgcaacttgcacaagaggatgctaaaaagatggctgtcaaagaagaaaaatatgat
ccgggttatgaagcagcatacggaggagcttattgtgatcgcacaatatatgaaaatgaa
cagtgcaatttctcttcaaatgaagctgcagcaagcaatccacagtactgcgaggggtca
tccttcagtgaagttcctaatggacaatggatggcacagtcctttgcagaccagattcca
gaattcaatactggaatgacacaagaacaagaaggaagcagtgcataa
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