Struthio camelus australis (South African ostrich): 104147994
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Entry
104147994 CDS
T08512
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04514
Cell adhesion molecule (CAM) interaction
scam04517
IgSF CAM signaling
scam04520
Adherens junction
scam04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104147994 (PTPRF)
04517 IgSF CAM signaling
104147994 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104147994 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104147994 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scam01009
]
104147994 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104147994 (PTPRF)
Enzymes [BR:
scam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104147994 (PTPRF)
Protein phosphatases and associated proteins [BR:
scam01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104147994 (PTPRF)
Cell adhesion molecules [BR:
scam04515
]
Immunoglobulin superfamily
Type II RPTP family
104147994 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
I-set
Ig_3
Fn3_VIN3
Fn3_ROS1
Fn3_PBP1
Ig_2
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
ig
DSPc
Ig_VEGFR-1-like_5th
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_PDGFR_d4
V-set
Ig_5
Fn3_PTPRU
Insulin_TMD
ICAM_N
DUF3377
Motif
Other DBs
NCBI-GeneID:
104147994
NCBI-ProteinID:
XP_009679259
Ensembl:
ENSSCUG00000011385
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MTVSHHCAGTCLFNLVRCFPVAEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDP
EISWFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLY
VRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNV
LELNNIMQSANYTCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNS
DPISYYVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELV
EARTGEQAPSSPPLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPVSMWQK
HNTDDSHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAES
DTRILLTWLPASQERITKYELLYWEGEGGVQQKVEFDPTSSYAVEGLKPDTLYKFRLGAR
SELGVGVYTPMIEARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIA
YQAVEGEDSTKHVVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESTPVHVRTDE
DVPSAPPRKVEVESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDV
MLSEAQWRAEDSVDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPT
MMISTTAMNTALIQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKG
ATYLFKLSAKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERN
GRIVNYTVVYRDINSQQDLVNVTKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQS
RTMPVEQVFAKNFRVNAVMKTSVLLSWEVPDSYKSSVPFKILYNSQSVEVDGHSMKKLIS
DLQPDTDYSFVLMNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLALPKVQT
TVPVRWYYIVVVPADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYI
AAQVDVLPETFTLGDEKNYKGFYNKPLSQDLSYRCFVLASLEEPLSQKRYAASPYSDEIV
MEVASAKQQDEPEMLWVMGPVLAVILIIIIVIAILLFKSKQERLKANGISVLAPFLFFAG
SSVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEV
NKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDF
WRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFA
LYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGR
TGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTE
VPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIM
PYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTI
VVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRT
IRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSI
VLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatcccatcactgtgccggaacatgtctctttaaccttgtgcgttgttttcct
gttgcagaagaccacctcccagctggcttccccaccattgatatgggcccgcagctcaag
gtggtagaaaaggcccgcacagccacgatgctttgcgccgccagcggtaaccctgatcct
gaaatctcctggttcaaggactttctgcctgtcgatactgcaactagcaatgggcgaata
aagcagctccgctcgggagctctgcaaatagagaacagcgaggagtcggaccaaggcaaa
tacgaatgtgttgcgaccaacagtgcgggaacccgctactctgccccagctaacctttat
gttcgagtgcggcgtgttgcacctcgattctctatccctccgagcaaccacgaggtgatg
cctggggggagcgtgaacctcacgtgcgtggcggtaggtgctccgatgccctacgtgaag
tggatggctggtgtggaggagctgaccaaagaagatgagatgcctgttggcaggaacgtc
ctggagctgaataacatcatgcaatccgccaactatacctgtgtggccatctcctccctc
ggcatgatcgaagccacagcccagatcactgtcaaagcgctgccaaaacctccaacagag
ccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcgggcaactct
gatcccatttcatattacgtcatccagtacaagcccaaatccttggagggccagttccag
gaggtagatggtgtggcaacaacgcgctatagtataggtgggctcagccccttctcggag
tacgagttccgggtcattgcagtcaataacattggcaggggtccccccagcgagctggtt
gaggcccggacgggagagcaagctccttcaagtccacccctcaaagtccaggcacggatg
ctgagtgccagcaccatgctggttcagtgggagcagccagaggagccaaatggacagatt
cgagggtaccgtgtttattatacaactgacccgcatctgcctgtgagcatgtggcagaaa
cacaacaccgatgacagccacctgacaaccgtggggagcctcatcacagggaccacgtac
agcatccgcgtcctggctttcacttcagtgggtgacgggcctccctcggacatcatccag
gtcaaaacacagcaaggggttcctgcccagccagctgacttccaggcagaggcagagtct
gatacccggatcctgctgacgtggctgccagcttctcaggaacgtattaccaaatacgag
ctgctgtactgggaaggagagggtggtgttcagcaaaaggtggagtttgacccaacctcc
tcgtatgctgtggaaggtctcaaaccagacacactgtacaagttccggctgggagcccgc
tctgagctgggggtaggagtctatacccccatgatcgaagccagaactgcccaatccacc
ccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccactaccatccgggta
agttgggtgccaccgcctgcccagagccgcaatggggtcatcacccagtactccattgcg
taccaggcggtggaaggagaggacagcaccaagcatgtggtggatggcattggacgggaa
cactccagctgggagatcaaggacctggagaaatggaccgagtacaaggtgtgggtaagg
gctcacaccgatgtggggccaggaccggagagcacccccgtgcacgtgcgcactgatgag
gatgtgcccagtgccccaccgcgaaaggtggaggtagagtctgtgaattcgactgccatc
cgggtcagctggaagctgcccatctccaacaagcagcacgggcagatccggggataccag
gtcacgtacgtgaagctggagaacaacgagcctagagggcagcccgtgatcaaggacgtc
atgctgtcggaagcgcagtggagagctgaggactccgtcgaccatgagacggtcattgga
ggcctgctgccagaaaccacctactcggtcactgtcgctgcctacaccaccaaaggagat
ggtgcccgcagcaagccgaaggtcatcaccaccacgggggcagtcccggggaagcccacc
atgatgattagcacgacagccatgaacacagccctcatccagtggcacccacccaaggag
atggtaggggagctgctgggttaccggctgcagtacagacgtcttgatgaagagaagatg
aacacgatagactttgggaagagagatcatcactacactgtgacgaacctgcacaagggg
gccacatacctgttcaagctgtctgccaagaacagagctggtccaggagaggaatttgag
aaggagatcactactgcagaagatgtgccaagcggcttcccgcagaacctgcgcgtggtg
ggtctcaccacttccaccacagaggtcgcatgggaacccccagtcttagcagagagaaac
ggcaggatcgtcaactacacagtggtgtatagggacatcaatagccagcaggacctggtt
aacgtcaccaaggacacaagtatcactttgaccaatttgaagcctgataccacttacgac
atcaaagtgagggcccgcaccaataagggagttgggccgctcagccccagcatccagtcc
cggaccatgcctgttgagcaagtgtttgctaagaacttccgcgtcaatgccgtcatgaaa
acgtctgtgttgctgagctgggaagtgcctgactcctataaatcctcagtgccttttaag
attctgtacaacagccagagcgtggaggtggacggccactcgatgaagaagctcataagc
gacctccagccggacacagactattcttttgtgctaatgaaccgcggaagcagcgctggg
gggctgcagcacctcgtctcgatccgcaccgcgcctgacgtcttgcagagcaaacccatc
gccacaaataagtacatacaggaaggaaagttcacgctcgccctccccaaagtccagacc
actgtgccggttaggtggtactacattgtggttgtgccagcggatcagagcaccagcagc
ccgactgctcggtggcggacacctgatgagatggagctggatcagctgctggaggccata
agccaagggagtcagagcaggcgccagcggcgccaagcggacaggctcaagccctacatt
gctgctcaagtggatgtgttgcccgagactttcacgctgggggacgagaagaactacaaa
ggtttctacaacaagcccctgtctcaagacctgagttaccgctgctttgtgctggcctcg
ctggaggagcccctttcccagaagaggtacgcagccagcccctactcagatgagattgtg
atggaagtggcttctgcaaagcagcaggacgagcccgagatgctgtgggtgatgggacct
gtcctggctgtgatactaatcatcatcattgtcattgctatactcctcttcaaaagtaaa
caagaaagactaaaggctaatgggatttctgttcttgccccgtttcttttctttgcaggt
tccagtgtccccagttgcccgaatatctcaagcatgcgcgatcacccccctatcccggtg
accgacctcgccgacaacatcgacaggctgaaggccaacgacgggctgaagttctcccag
gagtacgagtccatagatccaggacagcagttcacctgggagaactccaacctggaagtg
aataaaccaaaaaaccgctatgcaaacgtgattgcgtatgaccactcgcgtgtcatcctg
acctccatcgatggggtacctgggagtgattacatcaatgccaattacattgacgggtat
cggaagcagaatgcctacatcgctacgcagggaccactgccagaaaccctcagtgacttc
tggaggatggtgtgggaacagagaacagcaactatagtcatgatgaccaggctggaggag
aaatccagggtaaagtgtgaccagtactggccgagtcggggtacagaaacctatgggatg
atccaggtcactctgctggacacagtcgagctggcaacctacaccgtccggacctttgca
ctgtacaagaatggctccagcgagaagcgagaactgcgacagttccagttcatggcttgg
cctgaccacggggtaccagaataccctactcccatcctagctttcctgcgacgggtcaag
gcctgtaacccaccagatgctgggcccatggttgtgcattgcagtgccggcgtgggccga
actggttgcttcattgtcattgatgccatgctggagcggatgaagcatgagaaaacagtg
gacatctacggccacgtgacatgcatgcgctcacagcgcaactacatggtgcagacagag
gaccaatacatcttcatccacgaggccttgctggaggcagcaacatgtggtaataccgag
gtgcctgcacgcaacctctttgctcacatccagaagctgacccaggtcccgccaggcgag
agcgttactgcgatggagctggagttcaagctgctggccaactctaaagcacatacctca
cgtttcatcagtgccaacctcccatgcaacaaattcaagaaccgcctcgtgaacattatg
ccatacgagctgacgagagtctgtctgcagcccatccggggtgtcgagggctctgattac
atcaacgccagcttcatagatggatacaggcagcagaaggcctacattgccacacaagga
ccactggcggagaccacagaggatttctggcggatgctctgggagcacaactccaccatt
gtggtgatgttgacaaagctgcgtgagatgggccgggagaagtgccatcagtactggccc
gcagagcgctctgcccggtaccagtacttcgtggtggaccccatggcagagtacaacatg
ccacagtacatcctccgggagttcaaggtcacagatgccagggacggccagtcgcggacc
atccgccagttccagttcacagattggcctgagcagggagtgccaaagacaggagagggc
ttcattgacttcatcgggcaggtgcacaagaccaaggagcagtttgggcaggatgggccc
atcacggtgcactgcagtgctggggttgggcgcacaggtgtgttcatcacgctgagcatt
gtgctggaacggatgcgctatgagggggtcgttgacatgttccagacagtgaagaccttg
cggacacagcgaccagccatggtgcagacagaggaccagtaccagctgtgctacagagcg
gcactggagtatctcggcagcttcgaccactatgcaacgtaa
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integrated database retrieval system
