Struthio camelus australis (South African ostrich): 104150849
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Entry
104150849 CDS
T08512
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104150849 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104150849 (EFTUD2)
Spliceosome [BR:
scam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104150849 (EFTUD2)
Complex C
U5 SnRNP specific factors
104150849 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
Motif
Other DBs
NCBI-GeneID:
104150849
NCBI-ProteinID:
XP_009683616
Ensembl:
ENSSCUG00000018354
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MQGRTGMASVQAIAGRGSRCGAVPGMGSVQGSARSSITTHPLIRVPVPPPCSMDTDLYDE
FGNYIGPELDSDDDDDELGRESKDLDELEDDDEDDDMGDHDEDHPGMEVVLHEDKKYYPT
AEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSEL
IRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTI
VLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQ
ERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVC
FSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRS
FVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFT
GFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGV
QFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGN
WVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLR
KVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVE
TSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA
ARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVK
FKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYT
VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVP
GDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVL
NYPM
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagaaccgggatggcatcagtgcaggccatagcgggccgggggtcccggtgt
ggggcagtcccggggatggggtcagtgcagggcagtgcacgcagcagtatcaccacccac
ccgctgatccgcgtccctgtccctccaccctgcagcatggacaccgacctgtacgacgag
tttgggaactacatcgggccggagctggactctgatgatgacgatgatgagctgggcaga
gagtccaaggatctggacgagctcgaggatgatgatgaggatgatgatatgggagaccat
gacgaggaccaccctgggatggaggtggtgctgcatgaggataagaagtactatcccact
gctgaggaggtctatgggcctgaagtagaaacaatagtacaagaggaagatacgcagcct
ctcactgagcctattattaaacccgtgaaaactaaaaaattttctttgatggaacagacg
ttaccggttactgtctatgagatggatttcctggcagatctgatggataactcggagcta
attcggaatgtgactctgtgtgggcacctccatcatggcaagacttgttttgttgactgc
ctgatagaacagacacacccagaaatccgaaagcgctacgaccaggatctttgctacact
gatatattgttcacggagcaggagaggggtgtagggatcaagagcacaccagtgactatt
gttctgccagacaccaaagggaagtcttttctcttcaacatcattgacaccccaggccac
gtcaatttttctgatgaggtcacagctggccttcgtatttcggacggcgttgtgcttttc
attgatgcggctgagggggtgatgctgaacacggagaggctgatcaagcacgcagtgcag
gagaggctagcagtgactgtgtgcatcaacaagatagaccgcctgattctggagctcaaa
ttgccccctacagatgcttattacaaactccgacatatcgtagacgaagttaatggcctg
atcagcatgtattccaccgatgaaaacctggttctgtctccccttttggggaacgtgtgt
ttctccagttcacagtacagcatctgcttcacgctgggatcttttgcaaagatttatgca
gacacatatggagatatcaattatcaggagtttgcaaagcggctttggggtgacatctac
ttcaacccgaagacccggaagttcactaaaaaggccccaactagcagttcccagcgcagc
tttgtggagttcatccttgagcctctttacaagatcttggctcaggtagtgggggatgtg
gacacaaccctgcccaggactctggatgaactcggcatccacctgaccaaagaggagctg
aaactgaacattcgacccctcctgcggcttgtctgcaagaagttctttggggaattcaca
ggctttgtggacatgtgcgtgcagcatatcccttcgccgaaggtgggggccaagaccaaa
attgagcacacctacactggtggtgttgactccgatctaggggaggccatgagtgaatgc
gaccctgatggtccgttgatgtgtcacaccacaaaaatgtatagcacggacgatggcgtt
cagttccatgcctttggcagagtgctcagtggtactatccatgctggacagcctgtgaag
gtccttggagaaaactataccctggaggatgaggaggattcccagatctgcactgttgga
cgcctctggatctcggttgcaaggtaccacattgaggtaaaccgagttcctgctggcaac
tgggtgctgatagaaggagtggaccagcccatcgtgaagactgcaaccatcacagagccg
cgaggcaatgaagaggctcagatcttccgtcctttgaagttcaataccacatctgtcatc
aaaatagctgtagagccagtcaatccctctgagctgcccaaaatgttagatggtctccgc
aaagttaacaagagctacccgtcgcttactactaaggtggaagagtctggggaacatgtg
atcctggggacaggggagctctatttggattgtgtgatgcatgatctacggaagatgtat
tcagagattgatatcaaggtcgctgacccagttgtgacgttctgcgagacggtggtggaa
acgtcctccctgaagtgctttgctgagacacccaataagaagaacaagatcacaatgatt
gctgaacctctggaaaagggactcgctgaggacattgagaatgaagtggtccagataaca
tggaacagaaagaagctgggtgaattcttccagaccaaatatgactgggatttgctggct
gcccgctccatctgggccttcgggccagacgcaaccggcccaaacatcttagtagatgat
acattgccctcagaggtggacaaggcgctgctgggctctgtgaaggacagcattgtgcag
ggatttcaatggggaaccagagaagggcccctctgtgatgaattgatccgcaacgtgaag
tttaagatcctggatgcagtgattgctcaggagcccttgcacaggggtggaggacagatc
atcccaacagcccggagggtggtgtattcggctttcctgatggccacccctcgcctgatg
gagccatactattttgtggaggtgcaggcccctgctgactgcgtatctgcggtgtacaca
gttctggctaggcggagaggccatgtgacacaagatgctccaatcccaggctcccctctc
tacaccatcaaagccttcatcccagccattgattcgtttgggtttgagacagatttgagg
acccacactcagggacaagccttctcgctctctgtcttccaccactggcagattgtgcct
ggtgaccccttggacaagagtattgtcatccggcctctggagccccagccagccccgcat
ctggccagagagttcatgatcaagaccaggcgtaggaagggcttgagtgaggacgtgagc
atcagcaagttcttcgacgaccccatgttgctggagctggccaagcaagatgttgttctc
aactatcccatgtga
DBGET
integrated database retrieval system
