Struthio camelus australis (South African ostrich): 104152881
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Entry
104152881 CDS
T08512
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04010
MAPK signaling pathway
scam04120
Ubiquitin mediated proteolysis
scam04140
Autophagy - animal
scam04144
Endocytosis
scam04620
Toll-like receptor signaling pathway
scam04621
NOD-like receptor signaling pathway
scam04622
RIG-I-like receptor signaling pathway
scam05132
Salmonella infection
scam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104152881 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104152881 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104152881 (TRAF6)
04140 Autophagy - animal
104152881 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104152881 (TRAF6)
04621 NOD-like receptor signaling pathway
104152881 (TRAF6)
04622 RIG-I-like receptor signaling pathway
104152881 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104152881 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
104152881 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104152881 (TRAF6)
04121 Ubiquitin system [BR:
scam04121
]
104152881 (TRAF6)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104152881 (TRAF6)
Membrane trafficking [BR:
scam04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104152881 (TRAF6)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
104152881 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
Med21
RING_XB3-XBAT31
PspA_IM30
TRAF3_RING
Sina_ZnF
zf-RING_11
HAP1_N
UPF0242
U-box
CENP-F_leu_zip
Spc29
DUF1664
PUMA_CC
DUF16
HMMR_N
ADIP
Motif
Other DBs
NCBI-GeneID:
104152881
NCBI-ProteinID:
XP_009686740
Ensembl:
ENSSCUG00000018807
UniProt:
A0A093KDA2
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLHSDNSCGARDLESGCCAAMASACSVGAKEDSVSVSSGAGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVRCPNKGCCMKMELRHLEDHQLQCDFSTVECPQCQGSFQKNHLKEHMTQ
ECPRRQVCCPNCAMSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNIHVTAANRVPFINGLPFEHTL
FSRVSSAPYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGTV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctacacagcgataacagttgcggagcccgagacctggaaagtggctgctgt
gcagccatggccagcgcctgcagcgtgggagcaaaagaagatagtgtaagcgtcagcagt
ggggctggaaaccctccaagctctttcacagaggaaactcaaggatatgatgtggagttt
gatccacccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca
gtgcagacaccatgtggacaccgcttttgcaaaggctgcattgtcaaatcaataagagat
gcaggccataaatgtccagtagacaatgaaattctgcttgaaaatcaacttttccctgac
aacttcgctaaacgggaaatcctttctttaatggtgaggtgtcccaacaagggctgctgt
atgaagatggagttgaggcatttggaggaccaccagctgcagtgcgatttctccactgtg
gagtgccctcagtgccaaggatccttccagaagaaccacctaaaagagcacatgacgcag
gagtgtccaaggcgtcaagtctgttgtccaaactgtgccatgtctatggcttacgaagat
aaagagcttcatgaccaaacctgtccactagccaacgtattttgtgaatattgtaataca
gtgctcatcagagagcagatgcctaaccattatgataatgattgtcctactgcccccgta
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcagaggaatgagctggcacga
catatgcaagagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc
catgttactgctgcgaatcgtgtaccctttatcaatggcctaccctttgagcataccctc
ttctcccgtgtctcatctgccccatatgattgtaatcctgaagtcgaaaacttcaaagaa
actattcagcagctggaaggtcgtctggtaagacaagatcaccaaatcagagaactgatt
gctaaaatggagactcagaacactcacatggctgaactcaaacgtactatccgaaatttg
gagggaaaaattactgaaatggaggcacagcaatgtaatggtatttacatctggaagatt
gagaacttcagtggacttcagaaagcccaggaagaagagcgacctgttgtgatgcacagt
cctggcttctatactggaaaacctggctacaagctgtgtttgcggctacacatccaatta
ccaaacgctcagcgctgtgctaactttatatctctgtttgtccacactatgcaaggagaa
tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcag
tcagaaggacctgaaaggcagaatcatgaagaagtaatggaagccaagccggagttacta
gccttccagagaccaacaattcaccgcaatcccaaaggttttggttatgtgactttcatg
cacctacaaaccttgaagcaaagaacctttgtaaaggatgatactcttctggtgcgctgt
gaagttctaacacgtctagacttaaacagtctccgcagagaaggatttcaagctcgcagt
actgatgggactgtttaa
DBGET
integrated database retrieval system
