Serinus canaria (common canary): 103814151
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Entry
103814151 CDS
T05755
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103814151 (SLIT1)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103814151 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRCT
LRRNT
LRR_1
EGF_TEN
hEGF
LRR_9
LRR_14
EGF_Teneurin
EGF_4
EGF_CA
EGF_2
LRRCT_2
FNIP
LRR_NXF1-5
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103814151
NCBI-ProteinID:
XP_030097005
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MENQISMVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENFIQAIPRKA
FRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRL
HSNHLFCDCHLAWLSQWLRQRPTIGLFTQCAAPAQLRGLNVAEIQKNEFSCSGQTDSAHA
QLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPY
KKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANK
INCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD
FLRANPVETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVI
CPPKCRCESGVVECSNLKLTKIPDRIPQSTAELRLNNNEISILEATGIFKKLPHLKKINL
SNNKVSEIEDGAFEGASSVNELHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDS
FTGLRSVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIV
TGNPRCQNPDFLRQIPLQDVAFPDFRCEEGKEETTCIPRPQCPQECTCLDTVVRCSNKHL
KALPKGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT
LILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISSLPEGIFADVTSLSHLAIGANPLYCSC
NLRWLSSWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPPALSVQAKCNPCLSS
PCQNQGTCHNDPLGSYRCTCPSGYKGRDCEVALGGCSSNPCANGGTCQPQEGDGAGFRCL
CPVGFEDPSCHTTSDPCKEHSCENGGSCVPSATNYTCLCPAHYTGEFCEQPPNFCSDELN
PCQHDSTCISTSQGPRCECAPGYVGSNCSEDFDDCQDHRCQNNARCLDEVNGYSCLCTEG
YSGQLCEMPPHTAGQPGLCERAECQNGAPCVERGARALCQCLPGFGGPKCEKLLSVNFVD
RDTYLQFTDLQDWPRANITLQVSTAEGNGILLYNGDSDHMAVELYQGHVRVSYDPGTHPS
SAIYSAETINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNSGKHYTLNSEAPLYVGGMPV
DVNSAAFRLWQLLNGTSFHGCIRNLYINNELQDFTKTRMTPGVVPGCEPCRKLYCLHGIC
QPSGAQGPVCHCEPGWDGPHCDQPRGGPCQGHKCVPRGVPAP
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagatcagcatggtggagcgtggggcatttgatgacatgaaggagcttgag
cggctacggctgaaccgcaaccagctgcacaccctgcccgagcttctcttccagaacaac
caggcactgtcgcggctggacctgagtgagaacttcatccaggccatccccaggaaagca
ttccgtggggccaccgacctcaagaacctgcaattggacaagaaccagatcagctgcatc
gaggatggggctttccgtgccctgcgggggctggaggtcctgaccctgaataacaacaat
atcacttcaattcctgtgtccagcttcaatcacatgcccaagttgcggacgttccgcctg
cactccaaccacctcttctgcgactgccacctggcctggctctcacagtggctgcgccag
cgccccaccatcgggctcttcacccagtgtgctgctcccgcccagcttcgcggcctcaac
gtggctgagatccaaaagaacgagttcagctgctctggacaaacggactcagctcatgcc
cagctctgcagcttgtcctccggctcctgcccagccatgtgcacttgcagcaatggcatt
gtggactgccgcggcaaggggctgacggccatccctgccaacctgcccgagaccatgaca
gagatacgcctggaactcaacggcatcaagtccatccccccaggagccttctcaccctac
aagaagctgcggaggatagacctgagcaacaaccagatctcagagatcgcccctgacgcc
ttccaggggctacgctcactgaactccctggtgctgtatggcaacaagatcacggacctc
cctaagggtgtctttggaggactttttgccctgcagctgctgcttctcaatgccaacaag
atcaactgtgtacgggccgatgccttccaggatctgcagaacctctcactgctctctctg
tatgacaacaagatccagagcctggccaaaggcacgttcacctccctgcgggccatccag
actctgcacctggcccagaaccctttcatctgtgactgcaacctgaagtggctggcagat
ttcctgcgtgccaaccccgtggagaccagtggagcccgctgtgccagcccccggcgcttg
gccaacaagcgcatcggccagatcaagagcaagaagttccgctgctcggccaaagagcag
tatttcatcccagggacagaggattaccagctgaacagtgaatgcaacagtgatgtgatc
tgccctccaaaatgtcgctgtgaatctggtgtggtcgagtgctctaacctgaaactcacc
aagatcccagatcgcatcccacagtccacagctgagctgcgcctgaacaacaatgagatc
tccatcctggaggccactggcattttcaagaaactcccacatctgaagaaaatcaacctc
agcaacaacaaggtgtcagagatcgaggatggggcatttgagggggcatcctctgtcaat
gagctgcacctcactgtcaaccagctggagtctgtgcgcagtggcatgttcaggggcctg
gacgggctgaggacactgatgctgaggaacaaccgcatcagctgcatccacaatgacagc
ttcacagggctgcgcagcgtccgcctgctctctctgtatgacaaccagatcagcacaatt
gcaccgggtgcctttgacacgctgcagtccctctccacactgaacctgctcgccaacccc
ttcaactgcaactgccagctggcctggctgggggactggctgcgcaagaggaagattgtg
acagggaaccctcggtgccaaaaccctgacttccttcggcagatccccctccaggatgtg
gctttccctgacttcaggtgtgaggaaggtaaggaggagaccacctgcatcccccggcca
cagtgcccacaggaatgcacctgcctcgacacggttgtccgctgcagcaacaagcacctc
aaggccctgcccaaggggatccctaagaatgtcacagagctctatctagatggaaaccag
ttcactcaggtcccggggcagctctccacattcaagtatctgcagctcgtcgatctgagc
aacaacaagatcagctccctgagcaactcctccttcaccaacatgagccagctcactacc
ctgatcctcagctacaactccctgcagtgcatccctccgctggccttcgagggcctccgc
tccctgcggctgctgtctctccatggaaacgacatttccagcctccccgagggcatcttt
gcagatgtcacctccctgtcccacctagccatcggggccaaccccctgtactgcagctgc
aacctgcgctggctctccagctgggtcaagacgggctacaaggagccaggcattgcccgc
tgtgctgggccccccgacatggaaggaaagctgctgctcaccacccctgccaagaaattt
gagtgccaaggcccacctgccctgagtgtccaggccaagtgcaacccctgcctctccagc
ccctgtcagaaccagggcacctgccacaatgacccccttggctcctaccgctgcacctgt
cccagtggctacaagggccgtgactgcgaggtggcacttggtggctgctcctccaacccc
tgtgccaatggggggacctgccagcctcaggagggggacggagctgggttcaggtgcctg
tgcccagtgggctttgaggacccgagctgccacaccaccagcgacccctgcaaggagcac
agctgcgagaatgggggctcttgtgtgcccagtgccaccaactacacctgcctttgtcct
gcccactacacaggggaattctgtgaacagccacccaatttctgctcagacgagctcaac
ccctgccagcatgactccacctgcatctccactagccaggggcccaggtgtgagtgtgca
cccggctatgtggggagcaactgcagtgaggacttcgacgactgccaggaccaccggtgc
cagaacaatgcccgctgcctggatgaggtgaatggctactcctgcctctgcaccgagggc
tacagtggccagctctgcgagatgccgccccacaccgctggccagcctggcctctgtgag
cgagctgaatgccagaacggggccccgtgtgtggagcggggtgcccgtgccctgtgccag
tgcctgcctggctttggtggccctaaatgtgagaagctgctgagcgtcaactttgtggac
cgtgacacgtacctgcagttcactgacctgcaagactggccccgggccaatatcaccctt
caggtctccacggctgaaggcaatggcatcctgctgtacaatggtgacagcgaccacatg
gctgtggagctgtaccagggccatgtgagggtcagctatgaccctggcacccaccccagc
tcggccatctacagtgctgagaccatcaacgatgggcagtttcacactgtggagctggtg
accttcgaccagatggtgaacctgtccatcgacggtggcagccccatgaccatggacaac
tcgggcaagcactacacgctgaacagtgaggctcccctctatgtaggaggaatgcctgtg
gatgtcaactcggctgccttccgcctctggcagctcctcaatggcaccagcttccatgga
tgcatccgcaacctctacatcaacaatgagctgcaggacttcaccaagacacggatgacg
ccaggggtggtgccgggctgtgagccctgccgcaagctgtactgcctgcatggcatctgc
cagccctcgggcgcccagggccccgtgtgccactgtgagcctggctgggacgggccccac
tgcgaccagccccgtggcgggccctgccaggggcacaagtgtgtgccacggggtgtgcct
gccccttga
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