Serinus canaria (common canary): 103816943
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Entry
103816943 CDS
T05755
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103816943 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scan01007
]
103816943 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scan03016
]
103816943 (IARS1)
Enzymes [BR:
scan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
103816943 (IARS1)
Amino acid related enzymes [BR:
scan01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103816943 (IARS1)
Transfer RNA biogenesis [BR:
scan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103816943 (IARS1)
Prokaryotic type
Other AARSs
103816943 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
103816943
NCBI-ProteinID:
XP_018770487
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MAGRRMVQQVPENINFPNEEEKILTLWKNLNCFKECLKQSKNRPRFNFYDGPPFATGLPH
YGHILAGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEA
YNKECRGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRG
VKVMPFSTACNTPLSNFESHQNYKDVQDPSVTVSFPLEEDPDVSLVAWTTTPWTLPSNLA
LCVNPELQYVKLRDKATGKIYILMESRLVALYKSDSEYQILDRFPGIVLKGKKYKPLFEY
FIQCKEKGAFTVVVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDAS
GCFTAEVADFAGQYVKDADKHIIRWLKERGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSW
FVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDL
EEVVCVGSMAELEELSGVKVTDLHRESIDGLCIPSRRGKGALRRVPEVFDCWFESGSMPY
AQVHYPFESRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLA
SDGQKMSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLP
WYNAYRFLVQNVQVLQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAY
RLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTP
FITELMYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRV
IRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYVLEELNVRALTLSADKARYGVRLRA
EPEHTVLGRRLKGAFKPLMAAIKELSSEQLERFQETGSIVVEGHELHGEDLRLMYQMTEG
SAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRALP
EGEYLDTVIQQHAEFIFATIKADLKPYPVPTSREVLIQETTQLKGSELEITLVRGGLCQP
VGPACAYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNSKLTVFNGN
TELLQQTDLLGLSGRTLHVTAGSAPGLPSSPSALLCQYINLQLINAKPQECQKGTVGTLL
MENPVGQNGLTYKALLHETAKVFGLRSRRLKLFLDEALTHGKHKLLVCSSENPWNLLLRS
SSCNMRSSLITKSTLFTHWFVILPSNSILA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacggagaatggttcaacaagttccagaaaacataaattttccaaatgaggaa
gagaagatattgacactctggaaaaatctgaattgtttcaaggaatgcctgaagcaatca
aagaacagacctaggttcaacttctacgacgggcccccgtttgccacggggctcccccac
tatggccacattcttgcaggaaccatcaaagacattgtgaccagatttgctcatcaaagt
ggttttcatgttgagaggaggtttggctgggattgccacggcttgcctgtggaatatgag
attgacaagaccttgggcattaaagggccagaggacgtggcaaagatgggcattgaagct
tacaacaaagagtgcagagggattgtcatgagatacgccaaggagtgggagttcagtgtt
accagattaggacgctggattgactttgaaaatgactataaaactctttaccccgagttc
atggagtcagtgtggtgggttttcaagcagctctatgacaaaggcctggtgtacagaggg
gttaaggtcatgcctttttctactgcatgcaacacccccctgtccaactttgagtcccat
cagaactacaaggatgttcaggatccttcagtgaccgtgagcttccctctggaggaagat
ccagatgtttctctggttgcctggaccacgactccctggaccttgcccagcaacctggcc
ctgtgtgttaacccagagctgcaatatgtaaaactgagagataaagccacagggaagatt
tacattttgatggagtccaggctggtggcactgtacaaatctgacagtgaatatcagatt
cttgacaggtttcctggtattgttcttaaagggaagaaatacaaaccactctttgaatat
tttattcagtgcaaagaaaaaggtgcctttacagtggtagtggatggttatgtgaaggag
gaggaaggcacaggggttgtccatcaggctccctattttggtgctgatgattacagagtc
tgcatggattttaacatcattcagaaggactctgtgcctgtgtgtcctgttgatgcatca
ggctgcttcacagcagaagtggctgactttgctgggcagtatgtgaaggatgcagacaag
cacatcatcagatggctgaaggagaggggccggctgatccacagcaccaccttccagcac
agctaccccttctgctggaggtcagataccccgctgatctacaaagctgtgcccagctgg
tttgtcagggtggagcacatggtggagaagctgctggagaataatgcccagtgctactgg
gttccggatttcgtgcgggagaagcgctttgggaactggctgaaggacgctcgcgactgg
gccatctctcgcaaccgctactggggcacccccatccccctgtgggtcagcgaggatttg
gaagaggtggtttgtgttggttcaatggcagaactggaggagctgtctggagtgaaagtg
acagatctgcatcgagaaagcatcgacgggctgtgcatcccgtcgcgccgcgggaagggc
gcgctgcgccgcgtgcccgaggtgttcgactgctggttcgagagcggcagcatgccctac
gcacaggtgcactaccccttcgagagcaggagggagctcgaggacgccttccccgccgac
ttcatcgccgagggcatcgaccagactcgaggatggttctacactttgctggtgctgtcc
actgctctttttgggaagcctcccttcaagaatgtcattgtgaatggccttgtccttgcc
agtgatggccagaaaatgagcaaaaggaagaagaactaccctgatccgatgcacattgtg
aacagttatggagctgatgcactcaggttgtacctgatcaattctcccgtggtaagagca
gagaacctgaggtttaaggaggagggggtgagggatatcctgaaggatgtgttcctgccc
tggtacaacgcctatcgcttcctggtgcagaacgtgcaggtcctgcagcacaaggatgag
ggaagagaattcctttacaatgagaacacagttaaggagagcaataacatcatggataaa
tggattctttctttcacccagtccctcatccagttcttcaaagctgaaatggcagcttac
aggctgtacacggtggtgccccggctggtgaagtttgtggatgttctgaccaactggtac
gtcaggatgaaccgcaggaggctcaagggcgagaatgggactgaggactgcattatggcc
ttggaaactctgtttagtgtcttattctccatgtgcagactcatggcaccatatactcca
tttatcactgagctgatgtaccagaatctgaaaaccctcattgatccagcctcggtccag
gagaagaacactgagagcattcactacctcatgctcccccaagtcagggaggatctcatc
gacaaaaaaattgaaagtgccgtttcttgtttgcagtctgtgattgagctgggacgagtg
atcagagacagaaaaaccatcccagtcaagtatcctttgaaagaagtggtagttatccac
caggatccagaggctctggaaaacatcaggtctttagagaagtatgtactcgaggagctg
aacgtgcgggcgctgacgctgtccgcggacaaggcccgctatggcgtgcggctgcgggcc
gagcccgagcacaccgtgctgggccgccgcctcaagggcgccttcaagcccctcatggct
gccatcaaggagctcagcagcgagcagctggagaggttccaggagacaggcagcattgtt
gtggaaggacatgaactccatggggaagatctgcgtctcatgtaccagatgacagaggga
tctgcccagttcgaggcacactccgatgctcaggttttggtgctgctggatgtgacccca
gaccagtccatggtggatgaaggcgtggcccgggaagtgatcaatcgcatccagaagctc
cgcaagaagaggaacctggtccccacagatgagatcacagtgtactacagagccctgcca
gagggggaatacctggacactgtcatccagcagcatgctgagttcatttttgccacaata
aaggcagacctgaagccttacccagtgcctacctcaagggaagttctcatccaggaaaca
acccaactgaagggatcagagctggaaatcacactggtcagaggggggctgtgccagcct
gttggcccagcctgtgcctatgtcaacctcaaagtctgtgtcaatgggacagagcaagat
ggtgtgttgctgctggaaaatccaaaaggagataataccttgaacttcactggacttgta
gatgctgtctcctgcatttttggtcttaaaaattccaaactgacagtttttaatggaaac
acagagttgctgcagcagacagacctgctgggcctcagtgggaggactctgcacgtgaca
gcagggtcagcccctggcctgcccagctcccccagtgccctgctctgccagtacatcaac
ttgcagctgatcaatgcaaagccacaagaatgccagaaaggaacagtgggaactctccta
atggaaaaccctgttggtcagaatggattaacctacaaagctcttctgcatgagacagca
aaggtttttgggctcagaagcaggaggctaaagctcttcctggatgaagcactgactcat
ggtaagcacaaacttctggtttgctcatctgagaatccttggaatttattgttgaggagc
agctcatgtaacatgagatccagtttaattactaaatccacactgttcacacactggttt
gtaattttgcccagtaattcaatattggcataa
DBGET
integrated database retrieval system
