Serinus canaria (common canary): 103820119
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Entry
103820119 CDS
T05755
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103820119 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103820119 (SMG6)
03032 DNA replication proteins [BR:
scan03032
]
103820119 (SMG6)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103820119 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
103820119 (SMG6)
DNA replication proteins [BR:
scan03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
103820119 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
UPF0561
Motif
Other DBs
NCBI-GeneID:
103820119
NCBI-ProteinID:
XP_030087714
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MGFLNGSGQGFENMKEVKEPRHRKDNRRPDQEIYKPGLSRLRSKLVSPKQEASEKERNRA
EEDKEESAGDKDSVGVGAPAVEDCDKSDGPKQNGPSQEKEETETKGGLQSPENSSKQPIV
DEWCPKAPRRTKKPDQQIYQPGKRLHSAAKEPSLQSASEEITGRMEQLKVEGDEETEKGT
GKDTNRKIKSSTEDREGSQAGEAVKASRGDKGRRAERSDRVRRAGDEVLPGKLGSTKRYS
RTDKRRSRYRTCSTSSAGSSNSTDGALLVDGVERRQERARERIRPRKQLSVSSTDSLDDD
RIDEAEVYVSSRNSDRRRHSEQSRASRSESEWSSNGREVKGPFRVTFDSRTMNRDISLAD
ADKKKSLKALEISEARSQSREPQGKGRGILFLPANTDLSASSVGVPEATHPGPRLLLGGA
GSKGPRSRGRGGTARRLWDPNNPDQKPALKSQTAQLHFLDTDDEVSPTSWGEARQAQPSY
YKFQNSDNPYYYPRASGQGPQYPYGGYSLQYPMGPTNGVYPGAYYPGYPGQAGQYLCGPL
PPTPLSPEMEQQMRNMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRVEML
QLYERCILMDIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKDPQGENAQEIRNKLLLLLDE
GSSFFDGLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYRE
QANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPIL
TAKESLMSLFEETKRKSEQMEQRKHQVLDVSPNRRGKGKKSTLRQVGDDATRLEIWIHPS
HPRSCQGHESSRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEEVL
REFQVLLQHSPPPIGSTRMLQLVAINMFAVYNSQPKECISEDCRSVIQEQATALGLSMFA
LLVRRCTNLLRECVPVQPQEMEQEDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHPDTW
NPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLALLSLEEDRLLSGF
VPLLVAPQEPCYVERTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVP
DAMGKEMGSQEGKQLEDQKEDDVRIEAFEDDSETEGSGGEMDIKELRAKKQALARKVAEQ
QRRQDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLGSLVTLLDCRKFILVVPLIV
INELDGLAKGPEMEHRAAGYARQVQERARKSIEFLEERFESRDNCLRALTSRGNELESIS
FRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPIRLLREVVLLTDDRNLRVKA
LTRNVPVRDIPTFLKWAQEG
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttaaatggatcaggccaaggatttgaaaacatgaaggaggtgaaggagccg
aggcaccgcaaagacaacaggcgcccagaccaggagatttacaagcctggcctctccaga
ttgaggagcaaacttgtgtcaccaaagcaagaggcctcagagaaggaaaggaatagagct
gaggaagacaaggaggagagtgctggagacaaggactctgtgggagtgggagctccagca
gtggaggactgtgacaaaagcgatggccccaagcagaacggtccttcacaggaaaaggag
gaaacagagaccaaaggtggcctgcaaagcccggaaaactcatccaagcagcccattgtg
gatgagtggtgtccaaaggcccccaggagaaccaagaagccagaccaacagatctaccag
cctggaaaacgcctgcactctgctgctaaagaaccctccctgcagtcggccagcgaggag
atcaccgggaggatggagcagctgaaagttgagggagatgaagagactgagaaaggcact
ggaaaagacaccaacaggaaaatcaaatcaagcacggaggatagagaggggagccaggca
ggggaagcagtgaaagcctccaggggtgataaagggaggcgagcagagcggagtgacagg
gtgaggagggcgggggatgaggtgctgccggggaagctgggctccaccaagcgctattcc
cgcacggacaagcggcgcagccggtaccgcacctgcagcaccagctcagctggcagcagc
aacagcacggacggagccctgctcgtggatggggtggagaggaggcaggagcgtgccagg
gagaggatacgtcctaggaagcagctctctgtgtcctccacagactccctggacgacgac
aggattgatgaggctgaggtgtacgtctccagcaggaactcggacaggaggaggcattcc
gagcagagccgagcttccaggagtgagagtgaatggagcagcaatggcagggaagtcaag
ggaccctttcgagtgacatttgacagcaggaccatgaacagggacatcagcctggcagat
gcagataaaaaaaagtccctgaaggccttagagatttcggaggcgaggagccagagcagg
gagccccaagggaagggccgtgggattctgttcctgcctgccaacacggacctctctgcc
agctcagtgggtgtccctgaggccactcaccccgggcccaggctcctgctgggcggggct
ggcagcaaagggccccggagccggggccgaggtggcactgcccgccgcctgtgggaccca
aacaacccggaccaaaaacccgccctgaagagccagactgctcagcttcacttcctagac
acggatgatgaagtgagccccacctcctggggggaagcccgccaggcccagccctcctat
tataaattccaaaactctgacaacccctattattaccctcgtgcctccgggcaaggcccc
cagtatccctacggtggatattccctgcagtatcctatgggtccaaccaatggggtgtac
ccaggagcttattaccccgggtaccctggccaggcagggcaatacctgtgtggcccactc
ccccctactcctctgagccctgagatggagcagcagatgaggaacatgcagcagcaggag
ctcagcaaactcctgcgtgaggctgggaaccaggagcagcagctcagcaacctcctgtcc
agagaccgcatcagcccggaggggctggagaagatggcccagctgagggtggagatgctg
cagctctatgaacggtgcatcctcatggatattgagttctctgacacccagaacgtggac
cagttgctgtggaaaaatgctttttaccaggtgattgagaaattccggcagctcctcaag
gaccctcagggggaaaacgcccaagaaattcggaacaaactgctcctgcttctagatgag
ggatcttctttttttgatggcctcctccagaagctgcaggtctcctaccagttcaagctg
gaggactacatggatgggatggccatccgcagtaaacctctcaggaaaatggtgaagtac
gccctgatcagtgcccagaggtgcatgatctgccagggggacatttgccgctacagggag
caggccaacgacacggcgaactacggcaaggcccgcagctggtacctgaaggctcagcaa
attgctcctaaaaacggccgcccatacaaccagctggcacttctggccatctacacgagg
aggaagctggatgctgtgtactactacatgcgcagcctggctgccagcaaccccatcctc
actgccaaggagagcctgatgagtctgtttgaggagacaaaacgcaagtccgagcagatg
gagcagaggaaacatcaggtgctggatgtgagccccaaccgccggggcaagggcaagaaa
tccaccctgagacaagtgggagatgatgccaccaggctggagatctggatccatccctcc
cacccccgttcctgccagggccacgagtccagccgggattctgagcaggacaatgggctt
gggaacctcagccccagcgacctgaacaaaaggttcatcctcagttttctccatgcccat
gggaagctgtttaccaggattgggatggagactttccctgcagtggccgaggaggtcctg
agggagttccaggtgctgctgcagcacagcccccctcccatcggaagcacccgcatgctc
cagctcgtggccatcaacatgtttgcagtgtacaactcccagcccaaagagtgcatctct
gaggattgtcgctccgtcatccaggaacaggccacggccctggggctctccatgtttgcc
ctcctggtgaggaggtgcaccaacctgctgagggaatgtgtgccagttcagccacaagag
atggagcaggaggatgaggaggacgacatcaaggtctctgccttgccccaggacctgaag
gagctgctccccagtgtgaaggtctggtcggactggatgcttggccacccggacacctgg
aatcctcctccaacgtctcttgagcttcccaaacaggtctctgtagatgtgtgggcgacg
ctggctgacttctgtaacatactgaccacagtgaatcagtcggaggtgcccttgtacaag
gacccagatgacgaccttgccctgcttagcctggaagaggatcggctgctctcgggcttc
gttcccctgctggtcgccccccaggagccctgctacgtggagaggacctcggacaaggtt
attgcagccgactgcaagagggtcacagttctgaagtatttcctggaagccctttgtgga
caagaagagcctttgctggcattcaagggtggaaaatatgtgtcagtggcacccgtccca
gacgccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatcagaaggag
gatgatgtgaggattgaggcctttgaagatgactctgagactgaaggcagtggaggagag
atggacatcaaggagctcagagccaaaaagcaagcactggccaggaaagtcgctgagcag
cagcgccgtcaagacaagattcaggccgtgctgaaagaccagagccaaatgaggcagatg
gagctggagatcagacctgtctttctggtcccagacaccaatggtttcatcgaccacctc
ggcagtttggtcactctgctggactgcaggaagttcatcctggtggtgcccttgatcgtg
ataaacgagctggatggcctggccaagggcccagagatggagcaccgggctgcaggctat
gcccgccaagtgcaggagagagccaggaagtccatcgagttcctggaggagcgatttgag
agcagggacaactgtttgagggctctgaccagccgaggcaacgagctggagtccatctcc
ttccgcagtgaggacaccactggccagcagggaaacaatgacgacctgattctgtcctgc
tgcctccactattgcaatgacaaggccaaggatttcatgccctccaacaaagacgatccc
atccgtttgctcagggaagtggttttgctgacggacgaccggaacctgcgagtcaaagcg
ctgacccgcaacgtgccggtgcgggacatccccaccttcctcaagtgggctcaggagggc
tga
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integrated database retrieval system
