Serinus canaria (common canary): 103821581
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Entry
103821581 CDS
T05755
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03440
Homologous recombination
scan03460
Fanconi anemia pathway
scan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103821581 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
103821581 (BRCA1)
03460 Fanconi anemia pathway
103821581 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scan01009
]
103821581 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
103821581 (BRCA1)
03036 Chromosome and associated proteins [BR:
scan03036
]
103821581 (BRCA1)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103821581 (BRCA1)
Enzymes [BR:
scan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103821581 (BRCA1)
Protein phosphatases and associated proteins [BR:
scan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103821581 (BRCA1)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103821581 (BRCA1)
Multi subunit type E3
BRCC complex
103821581 (BRCA1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103821581 (BRCA1)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103821581 (BRCA1)
BRCA1-A complex
103821581 (BRCA1)
BRCA1-B complex
103821581 (BRCA1)
BRCA1-C complex
103821581 (BRCA1)
BRCA complex
103821581 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
103821581 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_3
zf-RING_5
zf-RING_6
BRCT_3
zf-RING_10
Zf_2nd_IFT121
Zn_ribbon_PaaD
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
103821581
NCBI-ProteinID:
XP_009094737
UniProt:
A0A8C9MU06
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MDFSVITIGQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLINKKKKGVV
ECPLCKSEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHHFPKTSTDATAAES
LCKESSVIQSKGFRNRRKSAKGNGQEKFTLQEASVNIQLPDAKMCHSRNKPQKSGSHKGT
FVEFGSESSEEFFKQASKTGFEDKGAAQISSQGRLEELESAEKENEKSCNAQPDKLWAKE
ITLPDILGEGDFSKECLSKKSIQSITECAKPAQVKVTECQSSPLDVLAAELLPEQCDRAG
AASPTLNGDTSFLKDTEEMDEQQSRHNSEHQESDLEDSSESRLDKSRKMDTDVQSMEAVA
GYEPENDSSQDKEPPLEELPQAETLHSATLNKVSKKRLKQSIQKVNEWFSKSNEVLSSSS
SVDESAASADVSGVGDLCLSDKESCISAKTDSMADSMEIATVEGRKRWSKQTAENIKDKI
FGKTYKRGRKSNPPCTLRDILPTRQKEDVAAAKCLKDFSKSRLKRKRKTACVLQPEDFIK
KKDTEKADGDPQSVNGGLGDAEKKRCDESAAVNESNLSQNRANNTLPEAEEGGECTWKKA
TEKVTAKHCDGEPEMYNCDQKSTKKRSSAAKRCRHSSRTMCALQLVVDRGSVFPDPAEPQ
IDSYPSSGEPRKADPEQNPVRHSRRLQLLSEEMAKETRKGVKGARNNSGHGRSVSRDQRN
VAAHSAECRDLCEPQDKLSYRPVTNLEGGDLQANEVQVNQKNLSDTAECGRSLFSPSRLP
SNCGSTVPDTGSQDNEILGSPLLLQLPSLSAGQTASPQTEEVTESPTAAPPECEHDSEGV
PEDFKAEKLPVAKNVLELTKEAEDSDLDTQYLRNIFRHPKRSSFSLFQTRAVEDPPSETF
HLSCAAQVENKANKQLQQEEKADQNLSRVSEKEELKTCECARVDPVPCFAVSTGEHRDGI
SQAAEEGTLTPARAGTAQTEHSGLLQEEQGNEMPVSNEIGTENELRQNPIESDGSQSDQS
NTEEHDSRQNDLNTGQENSFSSESNQAGRTEVVDGTGSILHFQSTSICSATCQQSPAELS
CEVTRTKRSKRERKHVKGNEEEAAQSVSPAVPECSAAEALEEPLGENCDLTGLSETPNAL
LCSDTDIENSSLCETDRKEQSAVFVKSDGAELQSTSASSKARPRGAPRSRRRVQKLPSSD
EESCEDEELPCFRAFIFSRSASTPLQTDKQMASVVESAGAECPGSPRGLPLSVSHDGNVE
QKVPEAALGPVCASPSQESECSINLFSSQSNMSEESLNGAQELNKHLPQAQVDKQMSSVN
DSKETSQNSSGGLKETKDESQEDPDKGANLGEASGSDSEISIVEDSCGAFSQGEILTTQQ
KNAMQNSLKKLQQEMAALEAVLKQNGSQSCEVLPVQKELPHPSTEAASEMDQTREENNRS
PELLLSASKSSLRKRSDLEKGPECYSALKNKTPSEKTKPVQEAVQEPRQCQPEAENAEEQ
KSESRPKSASVSSDLFGSETQSPDNSSSSVRLFTPQTAEATAGPVMAQNTEKSCGPGHKL
KSSECFPVPLLHNSTGKEKATNPVGTKRKKMSIVVSGLNHSEHLVVQKFVKKTQSTLSNQ
ITEGTTHVIMRTDEELVCERTLKYFLGIAGGRWVLSYQWVIQSFKAGRILDEESFEVRGD
VINGRNHQGPKRARQALTGKIFKGFEICCCGPFTDMTTEHLEWMVELCGASVVKQPDLFS
PTANSTAVVVVQPDAWKENVDIGAIQQQSNVALVTREWVLDSVACYQCQELSAYLVS
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaaaatgtgctctctgctatgcagaag
aacttggagtgcccgatatgcctggatgtggtgcaagagcctgtttcaacaaaatgtgat
cacatattctgcagattctgcatgttcaaactcatcaacaaaaagaaaaaaggtgtggtg
gagtgtcctctgtgtaagtctgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggactgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctaaaacatccacggatgccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccagagtaagggcttcagaaacaggaggaaaagtgct
aaaggaaatggacaagaaaagttcaccttgcaggaagctagtgtgaatattcagcttcca
gatgccaaaatgtgtcactcaagaaacaaaccccagaaatctggttctcacaagggtact
tttgtagagtttggctctgaatcatctgaagagttttttaaacaggcaagcaaaactggg
tttgaggacaaaggagcagctcagatttcttctcaaggaagactggaagaacttgagagt
gctgagaaagagaatgaaaagtcttgtaatgcacagcctgacaagctgtgggccaaagaa
ataacactgccagatatcctaggtgaaggtgatttctcaaaggaatgtttgagcaagaaa
agcatacagagcatcactgaatgtgccaaacctgcccaagtgaaagtgactgaatgccag
agttctcctttggatgttcttgctgcagagctgctcccagagcagtgtgacagagcaggg
gctgccagccccaccctgaatggggacacatcattcctaaaggacacagaagaaatggat
gaacagcaaagccggcacaacagtgaacaccaagagtctgatttagaagacagctcagag
agcaggctggataaaagcaggaaaatggatactgatgtgcaaagcatggaagctgtagcg
gggtatgaacctgagaatgactcttcccaggacaaggaacctcctctggaggagctacct
caggcagagacacttcactctgccaccctgaataaagtctccaagaagagactgaagcag
agcattcagaaagtcaatgaatggttttcaaaaagcaatgaggttttgtcttccagttct
tcagtggatgaatctgctgcatcagctgatgtttcaggtgtaggagatctgtgtttatca
gataaagagtcctgtatttcagcaaagactgactctatggcagattccatggaaattgca
acagtggaaggaagaaagaggtggtcaaaacaaacagcagaaaacatcaaagacaaaata
tttggcaaaacatacaagagagggaggaaatcaaatcccccttgtaccttgagagacatt
ttgcctactagacaaaaggaagatgtggctgctgctaagtgcctgaaggatttcagcaaa
agcagactcaaaaggaagaggaagactgcctgtgtcctgcagcctgaggatttcatcaag
aaaaaagacacagaaaaggcagatggggaccctcaaagtgttaatgggggacttggagat
gctgaaaagaaaagatgtgatgaaagtgctgctgttaatgagagtaacctctctcagaat
agagcaaataatacattaccagaagctgaggaaggaggagagtgcacgtggaagaaagcc
actgagaaggtcactgccaagcactgtgatggggaaccagaaatgtataactgtgatcag
aaaagcaccaaaaagagaagttctgcagcaaaaagatgcaggcattctagcagaaccatg
tgtgctctacagttagtggtggacagaggctctgttttccctgatccagctgagccacag
attgacagctacccaagcagtggagagcccaggaaggctgatcctgagcaaaacccagtc
agacacagcagaaggcttcagttactgtctgaggaaatggcaaaagaaacaaggaaagga
gtaaagggagccagaaataacagtggtcatggaaggtctgtctctagagaccaaaggaat
gtggcagctcactctgctgagtgcagagacctgtgtgagcctcaagataagctgagttac
aggccagtcactaatttggagggaggtgatctgcaagcaaatgaagtgcaggttaatcaa
aagaatttatctgacactgcagaatgtggaaggagtctgtttagtccttcacgtttgcct
tcaaactgtggttccactgtgcctgatacaggttctcaagacaatgaaatacttggtagc
cctctcctcctacagcttccttcactgtctgctgggcaaactgcctctccccagactgag
gaggtgactgaatcacctactgctgctcccccagaatgtgagcatgattcagaaggtgtt
ccagaggacttcaaagctgagaagttgccagtggctaaaaatgttttggaattgactaag
gaagctgaagacagtgacttggacacacaatatctaaggaatatattcaggcatcccaag
cgctcctccttcagcctttttcagactcgtgcagtggaggatcctccttctgaaaccttc
catctatcatgtgctgctcaggtagaaaataaggctaacaagcaattacagcaagaggag
aaagctgatcaaaacttgagcagggtttctgagaaagaggagcttaaaacctgtgagtgt
gcacgagttgatcctgtgccttgctttgctgtcagcacaggagagcacagggatggcatt
tcacaggctgcagaggaagggactctgacaccagcaagagcaggaactgctcagactgag
cacagtggattgctgcaagaggagcagggcaatgaaatgccagtgtcaaatgagataggg
acagaaaacgagttgagacagaatcccattgaaagtgatggaagccagagtgatcagagt
aacacagaggagcacgattccagacaaaatgatttaaacacaggccaggaaaacagcttc
agttcagaaagcaatcaggcaggaaggactgaagttgttgatggcacaggatcaatttta
catttccaatccacatcaatttgttctgcaacttgtcagcaaagccctgctgaactcagc
tgtgaagtcactaggacaaaaaggagcaaaagagaaagaaaacatgtaaaggggaatgaa
gaagaagcagcccaaagcgttagcccagcagtgcctgagtgttcagctgcagaggctctg
gaagaacctcttggggagaactgtgatcttacaggtttgtctgaaacccccaatgccttg
ctgtgctctgacactgacattgagaacagcagcctatgtgaaactgataggaaagagcaa
tctgcagtgtttgtgaaaagtgacggtgcagagctgcagagcacaagtgcaagctctaag
gcaaggcctcgaggtgctcccaggtctcgcaggcgagtgcagaaactgccatcttcagat
gaagagtcctgtgaggatgaggagctgccatgcttcagggcattcatcttcagcagatca
gcaagcacacctttgcagactgataaacaaatggcttctgtggtggagtctgcaggggca
gagtgtccagggagccccagagggctgcccctcagtgtcagccacgatggcaatgttgag
cagaaagtgccagaagctgccctaggtcctgtgtgtgcttcaccaagccaggagtcagaa
tgctctatcaacttattttcttcccaatccaacatgtctgaggaatcacttaatggagca
caagagctgaacaaacatttaccacaagcacaggtggacaaacaaatgagcagtgtaaat
gacagtaaagaaacttctcagaattctagtggagggctgaaggaaaccaaggatgagagc
caagaagacccagacaagggagcaaatctaggtgaagcttctgggtctgacagtgaaata
agtattgtggaagattcctgtggagctttctctcagggtgaaatcctcaccacacagcaa
aagaatgcaatgcaaaacagcctgaaaaaacttcagcaagaaatggctgcacttgaagca
gtgctgaagcagaatgggagccagagctgtgaggttttacctgtccagaaggaactgcca
catcccagtactgaagcagcatctgaaatggatcaaacaagagaagaaaataacaggtct
ccagaattgttgctttcagcttctaaatcctctttaaggaagagatcagatctggagaaa
ggccctgagtgttacagtgctctgaagaacaaaactccctctgaaaagacaaaacctgtg
caggaggcagtgcaggaacccaggcagtgccagcctgaagcagaaaatgcagaggagcag
aaatctgagagcagaccaaagagtgcatctgtctcatcagatctttttggaagtgagacc
cagagcccagataactcttcctcctctgtgaggctttttacccctcaaactgctgaagcc
acagctgggcctgtcatggctcagaacactgagaaaagctgtggcccaggacacaaattg
aagagcagtgaatgttttcctgtgcctcttctgcacaattcaactgggaaagaaaaagct
acaaatccagtggggaccaagaggaaaaaaatgtccattgtggtctcaggtctgaatcac
agtgagcatttggtggtccagaagtttgtgaaaaaaactcagagcactttatctaatcag
attactgaaggaacaacccatgtcatcatgagaacagatgaggagctggtgtgtgaacgg
accctgaagtatttcctgggcattgcaggaggaagatgggtgctcagttatcagtgggta
attcagtcttttaaagcaggaagaatactggatgaggagagctttgaagtcagaggagat
gtaatcaatgggagaaaccatcaaggtcccaagagggccagacaggccctgactggaaag
atctttaaaggctttgagatctgttgctgtggacccttcactgacatgactacagagcac
ctggagtggatggtggagctctgtggtgcctctgtggtgaagcagcctgacctgttcagc
cccacagcaaattctactgcagttgtggttgtgcagccagatgcttggaaggaaaatgtg
gatattggagcaatccagcagcagagcaacgttgccctggtaactcgggagtgggtcctg
gacagcgtggcctgctaccagtgccaggagctcagtgcttacctcgtgtcctga
DBGET
integrated database retrieval system
