Serinus canaria (common canary): 103821783
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Entry
103821783 CDS
T05755
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103821783 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103821783 (EFTUD2)
Spliceosome [BR:
scan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103821783 (EFTUD2)
Complex C
U5 SnRNP specific factors
103821783 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
103821783
NCBI-ProteinID:
XP_009094962
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
DTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLAD
LMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVGI
KSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER
LIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLS
PLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAP
TSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
NRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCD
ELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gacaccgacctgtacgacgagtttggcaactacatcgggcccgagttggactcggacgat
gacgacgacgagctgggccgagaggccaaagacctggacgagctggaggatgatgacgat
gatgatgacatgggggagcatgatgaggagcaccctgggatggaggtggtgctgcacgag
gacaagaagtactaccccacagcagaggaggtctatgggcctgaggtggagaccatcgtg
caggaggaggacacacagccactcactgagcccattatcaaacctgtgaaaaccaagaag
ttctccctgatggagcagacactgccagtcactgtctacgagatggatttcctggcagat
ctgatggacaactcggagctgatccggaatgtgactctgtgtgggcacctgcaccacggc
aagacatgttttgttgactgcctgatagagcagacacacccggaaatccggaagcgcgac
gatcaggatctctgctacactgatatattgttcacagagcaggagaggggggtggggatc
aagagcaccccagtgacgattgttctgccagacaccaaaggaaagtctttcctcttcaac
atcattgacactccaggtcatgtgaacttctctgacgaggtgacagccggccttcgcatc
tcggacggcgtcgtgctcttcatcgatgcggccgagggggtgatgctgaacacggagagg
ctgatcaagcatgcggtgcaggagaggctggcagtgactgtgtgcatcaacaagattgac
agactcatcttggagctgaaactgccccccacagatgcttactacaagctcagacacatt
gtagatgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgtgctgtct
ccccttctggggaatgtgtgcttctccagctctcagtacagcatctgcttcacactgggg
tcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgcgaag
cggctgtggggcgacatctacttcaacccgaagacccgcaagttcaccaagaaggccccg
acgagcagctcccagcgcagcttcgtggagttcattctggagcccctgtacaagatcttg
gctcaggtggtgggggatgtggacacaaccctgcccaggactctagatgaacttggcatc
cacctgaccaaagaggagttgaaactgaacatccggcccctcctgcggctcgtctgcaag
aagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcccca
aaagtgggggccaagacaaaaattgagcacacctacactggcggcgtcgactccgacctg
ggggaggccatgagcgagtgtgaccctgacggtcccttgatgtgtcacacaaccaaaatg
tacagcactgatgatggtgtccagttccacgcctttggcagggtgctcagtggcaccatc
catgctgggcagcccgtgaaggtccttggggagaactacaccctggaagatgaggaggat
tcccagatctgcactgttggacgcctctggatctcagttgcaaggtatcacattgaggtg
aacagagttcctgctggcaattgggtgctgattgagggcgtggaccagcccatagtgaag
acagcgactgtgacagagcctcggggcaatgaggaggctcagatcttccgtcccttgaag
ttcaacaccacatctgttatcaaaatagctgtggagccagtgaacccctcagagctcccc
aaaatgttggatggtctccgcaaagtcaacaagagctacccctcacttacaaccaaggtg
gaggagtctggggaacatgtgatcctgggaacaggagagctgtacctggactgtgtgatg
cacgacctgaggaagatgtactccgagatcgacatcaaggtggctgatccagtggtgaca
ttctgtgagacagtggtggaaacatcctccctgaagtgctttgctgagacacccaacaag
aagaacaagatcacaatgattgctgagcccctggagaagggactggcagaggacattgag
aatgaagtggtgcagataacatggaacagaaagaagctgggtgaattcttccagaccaaa
tatgactgggatttgctggctgcccgttctatctgggcctttgggccagatgccactggc
ccaaacatcctggtagatgacacactgccctcagaggtggacaagtctctgctgggttca
gtgaaggacagcattgtgcagggcttccagtgggggaccagggaagggcccctctgtgat
gaattgatccgcaacgtgaagttcaagatcctggatgcagtgattgctcaggagcccttg
cacaggggtggagggcagatcatccccacagcccgcagggtggtgtactctgccttcctc
atggccacccctcgtctgatggagccctactacttcgtggaggtccaggcccctgctgac
tgtgtgtctgctgtgtacacggtgctggcccggcgcaggggccacgtgacccaggatgct
ccaatcccaggctctcccctctacaccatcaaagccttcatcccagccattgattccttt
ggctttgagacagacttgaggacccacacgcagggacaagccttctctctctctgtcttc
caccactggcagatcgtgcctggggaccccttggacaagagcatcgtcatccggccactg
gagccacagccagccccacacctggccagggagttcatgatcaagaccaggcggaggaag
ggcctgagtgaggacgtgagcatcagcaagttcttcgacgaccccatgttgctggaactg
gccaagcaggatgtcgttctcaactaccccatgtaa
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