Serinus canaria (common canary): 103822131
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Entry
103822131 CDS
T05755
Symbol
KDM2A
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103822131 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103822131 (KDM2A)
04121 Ubiquitin system [BR:
scan04121
]
103822131 (KDM2A)
03036 Chromosome and associated proteins [BR:
scan03036
]
103822131 (KDM2A)
Enzymes [BR:
scan01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103822131 (KDM2A)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103822131 (KDM2A)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103822131 (KDM2A)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103822131 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103822131 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
103822131
NCBI-ProteinID:
XP_030095904
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRIVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKESRRPTTRRSILTSPIANGANVDYDELGKSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPCKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCVCNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDMAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSEHHSASRDERFKRRQLLRLQATERTMVREKXRXXXXXXXLQRPTKDVHG
TSIVPKLQAITASSANLQHSPRVVVRHAPARMPCSGGDEEAAAEEEEEEEEEDENAEEGG
AARLNGRGGRTQEGEESCIQREVWMSVFRYLTRRELCECMRVCKTWYKWCCDKRLWTKID
LSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLILAGCSWSAVCA
LSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNRSKLRNMIDFRLAGLDITDA
TLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNSLTELNMAGCNKLTDQALLY
LRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcgctctcttccgaggagtcggagatggagccc
gaggaagaacggatccgatacagccagagattgcgtggcacgatgaggcggcgttacgag
gacgacggcatctccgatgatgagattgaagggaagaggacctttgacctcgaggaaaag
ctgtccaccaacaagtttaactccactttcgtggtctttatggaaggcaaagacttcaca
gttgagtatatccagcggggtggcctgagggacccgctcatcttcaggagctcggacggc
ctggggataaagatgccggatccggacttcagcgtgaacgatgtgcggctgtgtgtgggg
agccgacggatagtggatgtgatggatgtgaacacgcagcgggacatcgagatgtccatg
gcgcagtgggcacgctactacgaaacgccggaggaggagcgggagaaactctacaacgtc
atcagcctggagttcagccataccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcctggagatgcaatatccaaaggtgcagaaatactgtttgatgagt
gtcaagggctgctacacagatttccatgtggactttggtggcacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaatctggagctc
tatgaaaactggcttctctcagggaagcagggagacattttccttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttggcggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcatcgaggaccgcacacgggtcccaaataaa
tttcgttatcccttttattacgagatgtgttggtacgtgctggagcgttacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctcagcatggatatg
gagctcagctcctcagactctgtgaacatggaagaggaggaggaggaggaggatgatgag
gatgcagcagggaaggaatcccggcgccccacgaccaggaggtccattctcaccagcccc
attgccaacggtgccaatgtggactatgacgaactgggcaagagctgccggagcagcctg
ccaggtctcaagaagaccccatccatagactcttccgactccagccggggctcccaaaac
ggccaggcctgggacccgagcgggggcagcccctgcaagagcaggaaggtgcacctgacc
caatttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctccctctgcac
aagaagtgcgttcccactggcatcgaggacgaggatgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgaccccaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccacacaccatgaagccagcaccgcgcccgactcccgtcaggtcc
acggtgtctcccatcgtgtcaggcgcccggcggaggcgggtgcggtgccggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaaaaagttcggc
gggcccggccgcatgaagcagtcctgtgtcctccggcagtgcttggcgcccaggttgcct
cactcggtcacgtgtgcactttgtggggaggtggatcagaatgaggactcgcaggacttt
gagaagaagctcatggagtgctgtgtctgcaacgagattgttcaccctggctgtctgcag
atggatggggaagggctgctcaatgatgagctccccaactgctgggagtgccccaagtgc
taccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagcgacgatgac
atggcacaagccaaggtgctacggcccctgcggagctgtgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgacccggcgtccccccgcggggtg
gtgacacgctcgtccccaggggccgggcccagcgagcaccacagcgccagccgggacgag
cgcttcaagcgccggcagctgctgcggctccaggccacggagagaaccatggtgcgggag
aagnngagaannnnnnnnnnnnnnnnnnnnctccagcgccccaccaaagatgtccacggc
acttcgattgtccccaagctccaagccatcacggcctcctcggccaacctgcagcactct
ccgcgcgtggttgtgcgccacgcgcctgccaggatgccctgcagcgggggcgacgaggag
gcggccgccgaggaagaggaggaggaagaggaggaggacgagaacgcggaggaggggggg
gcggcccggctgaatgggcgcgggggccggacgcaggagggcgaggagagctgcatccag
cgcgaggtctggatgtccgtgttccgctacctcacccgcagggagctgtgcgagtgcatg
cgggtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagac
ttgagcaggtgcaagtccatcaccccgcaggcgctgagcggcatcatcaaaaggcagccg
gtcagccttgacctcagctggaccaatatctcaaaaaaacagcttacatggcttgtaaac
aggctgccaggcctgaaagacctcatcctagcgggctgttcctggtctgcagtctgtgcc
ctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatc
aaggaccctcagatccgggacttactcacgcctccaacagacaaacccagtcaggacaat
cgcagcaaactccgcaacatgattgacttccggctcgcagggctggacatcacggacgcc
acgctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgc
aaccacctcacggaccagtcggccaacctcctcaccgccgtgggatcctccacgcgcaac
tccctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtac
ctgcgccgcatctccaacgtcaccctcatcgacctgcggggttgcaaacagatcacccgc
aaagcctgtgagcacttcatctcggacctgtctatcaacagcctctactgcctgtccgat
gagaagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
