Serinus canaria (common canary): 103823400
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Entry
103823400 CDS
T05755
Symbol
PBX1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-B-cell leukemia transcription factor 1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103823400 (PBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103823400 (PBX1)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103823400 (PBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
HTH_3
UCH
EF-hand_2
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
103823400
NCBI-ProteinID:
XP_030082197
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MDDQPRLMHTHSGVGDAGHPGLSQHMQDGPGGAGGGGXGRKQDIGDILQRSXTITDQSLD
EARAQKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG
PEKGGGSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHV
MNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRN
FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ
EEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQ
GAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTE
GPGSVHSDTSN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagccgcggctgatgcacacgcacagcggggtgggggatgcggggcacccg
ggcctgtcccagcacatgcaggatggaccaggcggggcgggagggggaggcnnaggcagg
aagcaggacatcggagacatcttacagagatcatgaaccatcacggaccagagtttggac
gaggcgcgagcccagaaacatgctttaaactgccacaggatgaagccggcgctttttaat
gtcttgtgtgaaatcaaagagaaaacagtgctgagcatccggggggcgcaggaggaggag
cccacggacccccagctgatgaggttagacaacatgctgctggcagagggggtggctggc
cccgagaagggagggggctcggccgccgctgccgccgccgccgccgcatccggaggagcc
ggctccgacaactcggtggagcactcggactacagagccaaactgtcccagatcagacag
atctaccacacggagctggagaagtacgagcaggcgtgcaacgagttcaccacgcacgtg
atgaacctgctgcgcgagcagagccggacccggcccatctcgcccaaggagatcgagcgc
atggtgagcatcatccaccgcaagttcagctccatccagatgcagctgaagcagagcacg
tgcgaggccgtcatgatcctgcgctcgcggttcctggacgcacggcggaagagacgaaac
ttcaacaagcaagccacagaaatcctgaatgagtatttctattcccatctcagcaaccct
tatcccagtgaggaagccaaagaagagctagccaagaaatgtggcatcacagtctcacag
gtatcaaactggtttggaaataagagaatccggtacaagaagaacataggtaaatttcaa
gaggaagccaatatttatgctgccaaaacagctgtcacggctaccaacgtgtcagcccat
ggaagccaggctaactcaccctcaactcccaattcagctggttcttccagttcttttaac
atgtcaaactctggagatttgttcatgagcgtgcagtctctcaatggggattcttaccaa
ggggcccaggttggagccaacgtgcagtcacaggtggatacccttcgccatgttatcagc
cagacaggaggatacagtgatggactcgcggcaagtcagatgtatagtccgcagggcatc
agtgctaatggaggttggcaagacgctactaccccatcgtcggtgacctcccccacagaa
ggccctggcagcgttcactctgatacctccaactga
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