Serinus canaria (common canary): 103824562
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Entry
103824562 CDS
T05755
Symbol
OTOF
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103824562 (OTOF)
Membrane trafficking [BR:
scan04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103824562 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Med19
Motif
Other DBs
NCBI-GeneID:
103824562
NCBI-ProteinID:
XP_018780555
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MKLGKTRPSKDEHRKQDDPAVLETEDLDRKAMRYGAGLEPDTISLASVTAVTTNVSNKRS
KPDIKMEPSAGRPMDYQVSITIIEARQLVGLNMDPVVCVEVGEEKKYTSMKESTNCPYYN
EYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAI
LSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETEEDDIEGNLLLPDGVPPERQWAR
FYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVAFAGQKGKTSIQKSSYEPLW
NEQIIFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLPTFGPAWVN
MYGSTRNYTLMDEHQELNEGLGEGVSFRARLLLGLAVEILDTTNPEINSSTEVQVEQATA
VADNCSGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGNQVDGSSKPLLRRKKEG
GDGDEEESELLQNSSDDEGGEEGELVSVSSSQPMKPLVTDRNYFHLPYLEKKPCIYIRSW
WQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERRLRGVLEELSSGCLRFLTL
ADKDQHHSSRTRLDRERLKSCMRELENMAQQATALRSQVKRNTMKDKLKLVQNFLQKLRF
LADEPQHTIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEEMGKDCAKVKTVFLKLPGKR
GFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEEKKTPRGQNLPSFPPISLLYTKK
QVFQLRAHMYQARSLFAADSSGLSDPFARVFFISQSQCTEVLNETLCPTWDQLLVFDNVE
LYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEEYCPPRFPPQLEYYQ
IYRGNATAGDLLAAFELLQIGPGGKSDLPPIDGPTDMDRGPILPVPLGIRPVLSRYRVEI
LFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENEL
LHPPLNIRVVDCRAFGRYTLVGSHTVSSLRKFIYRPPDKKAEHWNMAAKHLNGYLAMTSR
AHRSRPTGEIVVNMEPEVPIKKMDTMVKLEANSDAVVKVDVTEEEKEKKKKKKKGGGGGG
AGGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEEMEIGEGSKAQV
KNKDKDKDKSKVPKDDKKKKQQPVPELPEKKNKQKIDELKVFNKELESEFDNFEDWLHTF
NLLRGKIGDNDDNATEEERIVGRFKGSMCVYKVPLPDDISKEAGYDPTFGMFQGIPSNDP
INVLVRVYVIRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIEA
TFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGVSQTYSIHGYNTWRDP
MKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDENGQKKPTDEHLALAVLR
HWEDIPRAGCRLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKP
KKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNF
NWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIEL
DLNRFPRGAKTSKQCSLEMVTNEAELPMISIFKQKRVKGWWPFVARDENDELEITGKVEA
ELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIKYLICTRYKWLIIKI
VLALLLLIMVALFLYSMPGYMVKKLLGA
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttggaaagacacgtccatccaaggatgagcatcggaaacaagacgatccggct
gttctggaaacagaagacctggatagaaaggccatgagatacggagcaggcctggagcca
gacaccatctccctggcctctgtcaccgctgtcaccaccaatgtctccaacaaaaggtcc
aagcccgacatcaagatggagccgagtgctggaaggcccatggattaccaggtcagcatc
accatcatcgaggcccggcagctggtggggctcaacatggaccccgtggtgtgcgtggag
gtgggggaggagaagaaatacacctccatgaaggaatccaccaattgtccttactacaat
gagtattttgtcttcgatttccacgtcccccctgatgtcatgttcgacaagatcatcaag
ctctccgtgatccactccaaaaacctcctgaggagcgggacattggtggggtccttcaag
atggatgttgggaccgtttatacccagcctgagcaccagttttaccacaaatgggccatc
ctgtccgaccccgaggacctcacggccggcctcaagggctacctcaagtgtgacatcgcc
gtggtgggcaaaggggacaacatcaagaccccgcacaaggccaacgagacggaggaggat
gacatcgaagggaacctcctgctccccgacggggtccccccggagcggcagtgggctcgg
ttctacatcaagatctaccgcgccgaggggctgccgcgcatgaacaccagcatcatggcc
aacgtcaagaaggcgctcatcggggagaacaaggacctggtggacccctacgtgcaggtg
gccttcgcggggcagaagggaaagacatccatacagaagagcagctacgagcccctctgg
aacgagcaaatcatcttcacagagatgtttcccccgctgtgcaagcggatcaagatccag
atccgggactcggacaaggtcaacgacgtggccatcgggacccatttcatcgacctgagg
aagatctccaatgaaggagacaaaggattcctgcccaccttcggacccgcctgggtgaac
atgtacggctccacgcggaattacaccctcatggacgagcaccaggagctcaacgagggc
ctgggcgagggcgtttccttccgtgcccggctcctgctgggcctggccgtggagatcctg
gacaccaccaaccccgagatcaacagctccactgaggtgcaggtggagcaggccacggcg
gtggctgataactgcagcgggaagatggaggaattcttcctcttcggagccttcctggag
gccaccatgatcgacaggaagattggggacaaacccattaacttcgaggtcaccataggt
aactatggcaaccaggtggatggttccagcaaacccctcctgaggaggaagaaagaggga
ggggatggggatgaggaggagtcggagctgctccagaattccagtgatgatgaaggtggc
gaggagggagagctggtttctgtttcttcatcccagcccatgaagcccctggtcacagac
aggaattacttccacctgccctacctggagaagaagccctgcatctacatccggagctgg
tggcaggaccagcggcgccggctctacaacgccaacatcatggacaagatcgcggacaag
ctggaggagggcctcaacgacgtgcaggagatgatcaagacggagaagccgcacccggag
cgccggctccgaggggtcctggaggagctcagcagcggctgcctgcgcttcctgaccttg
gctgacaaggaccagcaccactcgtcccgcaccaggctggacagggagaggctcaaatcc
tgcatgagggagctggagaacatggcccagcaggccacggccctgcgctcccaggtcaag
aggaacaccatgaaggacaagctgaagctggtgcagaacttcctgcagaagctgcggttc
ctggcagacgagccccagcacacgattcccgacgttttcatctggatgatgagcaacaac
aagcgcatcgcctacgcccgcatcccttccaaggacatcctgtactccatcgtggacgag
gagatgggcaaggactgcgccaaagtgaagacagttttcctcaagctccctgggaagagg
ggcttcggccctgctggctggacagtccaagccaagatggagatctacctgtggctaggc
ctcaacaagcagcgcaaggacttcctgagcggcctcccctgtgggttcgaggagaagaaa
accccccgaggacaaaacctgccctccttcccacccatcagcctcctgtacaccaagaaa
caggtgttccagctgcgagcccacatgtaccaagccaggagtttgtttgcagccgacagc
agcggcctctcggaccccttcgcacgggtcttcttcatctcccagagccagtgcaccgag
gttctcaacgagaccctgtgcccaacctgggaccagctcctggtgttcgacaacgtggag
ctgtacggggaagctcatgagatgcgggatgacccccccatcattgtcatcgagatctac
gaccaggacactgtgggaaaagccgacttcatgggccggacgttcgccaagccggtggtg
aagatgtcggatgaggagtactgccctccacgcttcccaccacagctggaatattaccag
atctaccgcggcaacgccacagctggggacctgctggctgccttcgagctgctccagatc
ggccctgggggtaaatcagacctgccccccatcgatggccccacggacatggaccgaggt
cccatcctgccggtgcctctgggaattcggccggtgctgagcagatacagagtggagatc
ttgttctgggggctcagggacctgaagagagtgaacctggcccaggtggaccggccccgt
gtggacatcgagtgtgccgggaagggcgtccagtctgccctgatccagaactacaagaaa
aaccccaacttcagcactttggtcaagtggttcgaggtggacctcccggagaacgagctg
ctgcacccgcccctgaacatccgcgtggtggactgccgcgccttcgggcgctacaccctg
gtgggctcccacaccgtcagctccctccgcaagttcatctaccgcccgcccgacaagaaa
gccgagcactggaacatggcagccaaacacctcaatggctacctggccatgaccagcagg
gcccatcgctctcgccccacaggggagatcgtggtcaacatggaacccgaggtccccatc
aagaagatggacacgatggtgaagctggaagctaattccgatgcagtggtgaaggtggat
gtgaccgaggaagagaaggagaaaaagaagaagaagaagaaaggaggaggaggaggagga
gcaggaggtggggaggaagtggaggaggaggagccggatgagagcatgttggactggtgg
tccaagtacttcgcttccattgagacgatgaaggagcaactccggcagcaggaagcggcg
gcggcagaagcagaggagaaggaggagatggagattggagagggctccaaggcccaggtg
aagaacaaggacaaggacaaagacaagtccaaggtgcccaaagatgacaagaaaaagaag
cagcagcctgtccctgagctccccgagaagaagaacaagcagaagattgatgaactcaag
gtcttcaacaaagagctggaatcagagtttgacaactttgaggactggctgcacaccttc
aacctgctccgggggaagattggggacaacgatgacaacgccacagaggaggagcgaata
gtggggaggttcaagggctccatgtgcgtctacaaagtgccgctccccgatgacatcagc
aaggaggcgggatatgaccccacctttgggatgttccaggggatccccagcaatgacccc
atcaacgtgctggtccgagtctacgtcatcagggccacggatctccacccggctgacatc
aacgggaaagccgatccctacatcgccatcaagctgggcaagacagacatcaaggacaag
gagaactacatctccaagcagctgaaccctgtttttgggaaatccttcgacatcgaggcc
accttccccatggagtccatgctgaccgtggctgtgtacgactgggatttggtgggcact
gacgacctcattggggagaccaagatcgacctggagaatcgcttctacagcaagcaccgg
gcgacctgcggcgtgtcccagacctactccatccacgggtacaacacctggcgtgacccc
atgaagccctcccaaatcctgtccaagctgtgcaaagagggaaaagtggatgggccgcac
ttcgggcctgggggaagagtgaaagttgccaacagggtcttcaccggccccacggagatt
gaggatgaaaatggccagaagaagccgacggatgagcacctggcgctggcggtgctgcgg
cactgggaggacatcccgcgagctggctgtcgcctcgtccccgagcacgtggagacgcgg
ccgctgctcaaccccgacaagccgggcatcgagcagggccgcctggagatgtgggtggac
atgttccccatggatatgccagcgcctggccctgccatcgatatttctcctaggaaacca
aagaagtacgagctcagggtgatcgtgtggaacaccgacgaggtcatcctggaggacgat
gactatttcactggggagaaatccagtgacatttttgtcagggggtggctgaaggggcag
caggaggacaagcaggacacggatgtccattaccactccctcactggtgaaggcaacttc
aactggcgctacatcttccccttcgactacctgatggccgaggagaagatcgtcatctcc
aagaaggaatccatgttctcctgggatgagaccgagtacaagatcccggcccgcctcacc
ctgcaggtctgggatgccgatcacttctcagccgatgatttcctgggggccatcgagctg
gacctgaaccgcttcccccggggagccaagacgtccaagcagtgcagcctggagatggtg
accaacgaggctgagctgcccatgatctccatcttcaagcagaagcgggtcaagggctgg
tggccgttcgtggccagagatgagaacgatgagctggagatcaccggcaaagttgaggct
gagctgcaccttctgacagcggaggaggctgagaaatcccctgctgggctggctcggaac
gagcctgatcccctggagaaacccaaccgtccagacacgtcgttcatctggttcctgaac
ccactcaagtccatcaaatacctcatctgcacccgctacaagtggctcatcatcaagatc
gtgctggccctgctgctcctcatcatggtggccctgttcctctacagcatgcccggatac
atggtcaagaagctgctgggagcatga
DBGET
integrated database retrieval system
