Serinus canaria (common canary): 103826724 Help Entry 103826724         CDS       T05755                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism scan  Serinus canaria (common canary) Pathway scan04010   MAPK signaling pathway scan04120   Ubiquitin mediated proteolysis scan04140   Autophagy - animal scan04144   Endocytosis scan04620   Toll-like receptor signaling pathway scan04621   NOD-like receptor signaling pathway scan04622   RIG-I-like receptor signaling pathway scan05132   Salmonella infection scan05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:scan00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103826724 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103826724 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103826724 (TRAF6)    04140 Autophagy - animal     103826724 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103826724 (TRAF6)    04621 NOD-like receptor signaling pathway     103826724 (TRAF6)    04622 RIG-I-like receptor signaling pathway     103826724 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103826724 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103826724 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:scan04131]     103826724 (TRAF6)    04121 Ubiquitin system [BR:scan04121]     103826724 (TRAF6) Enzymes [BR:scan01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103826724 (TRAF6) Membrane trafficking [BR:scan04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103826724 (TRAF6) Ubiquitin system [BR:scan04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103826724 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-TRAF_2 zf-C3HC4_4 zf-RING_5 SlyX Med21 PspA_IM30 RING_XB3-XBAT31 TRAF3_RING zf-RING_11 HAP1_N DUF4455 CENP-F_leu_zip U-box zf-C2HC_3 UPF0242 Spc29 ATG16 DUF1664 DUF16 HMMR_N PUMA_CC DUF2730 ADIP DM Motif Other DBs NCBI-GeneID:  103826724 NCBI-ProteinID:  XP_009100399 UniProt:  A0A8C9U4W5 LinkDB All DBs Position Unknown AA seq 545 aa AA seqDB search MSLLHSEGSCGGREAESGCCAAMASACSAAAKEESCAGGSAAGSAPASFSEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNRLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL FSHVSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMETKPELL AFQRPTIHRNPKGFGYVTFMHLETLKQRTFIKDDTLLVRCEVLTRLDLNNVRREGFQARS TDGAM NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctgcacagcgagggcagctgcggaggccgggaggcggagagcggctgctgc gcggccatggccagcgcctgcagcgccgccgccaaggaggagagctgcgccgggggcagc gccgcaggcagcgcgcccgcatccttctccgaggagacgcagggctacgacgtggagttc gacccgcccctggaaagtaaatatgagtgtcccatctgtttgatggctctccgggaagcg gtgcagacgccatgcggccaccgtttctgcaaaggctgcattgtcaaatccataagagat gcaggtcacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgac aacttcgccaaacgggaaatcctttcattaatggtcaaatgtcccaacaagggctgcagc atgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtg gaatgcctgcagtgccaaggaaccttcccaaagaaccgtctgaaggagcacatgacccag gagtgtccgaggcgtcaagtgtgttgcccaaactgtgccacctctatggcctatgaagat aaagagcttcatgaccaaacctgcccacttgccaatatatattgcgaatattgcaacacg gtgctcatcagggagcagatgcctaaccattatgacaatgattgtcctactgccccagtg ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga catatgcaggagttcactcaggttcacatgaggatgatggctcagagttttcagaatatc agtgttactgctgcaaatcctgtgcccttcatcaatggcctaccctttgagcctgccctc ttctcacacgtgtcacatgctgcctacaactgcaatccagaagttgaaaacttcaaggaa actattcagcagttggaaggtcgtctggtgagacaagatcaccaaatcagggaactcatt gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatacgaaatttg gagggaaagattactgaaatggaggcacaacaatgtaatggtatttatatctggaagatt gagaacttcagtggactgcagaaagcccaggaagaagagagacctgtagtgatgcacagt cctggcttctatacagggaagcctggctacaagctgtgcttgcgcctgcatatccagtta ccaaacgctcagcgctgcgctaattttatctctctgtttgtgcacactatgcaaggggaa tatgacagccacctgccctggcctttccaaggcaccattcgactttctattttggatcaa tcagaaggcccagaaaggcagaaccacgaagaggtgatggaaaccaagccagagctgctg gccttccagagaccgacaattcaccgcaatccaaaaggttttggttatgtgactttcatg cacctggagaccttgaaacagagaaccttcatcaaggacgacacgctcctggtgcgctgc gaggtgctcacgcgcctggacttgaacaatgtccgcagagaaggattccaggcccgcagt actgatggagccatgtag

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