Entry |
|
Name |
(RefSeq) LOW QUALITY PROTEIN: interferon-like
|
KO |
|
Organism |
scan Serinus canaria (common canary)
|
Pathway |
scan04060 | Cytokine-cytokine receptor interaction |
scan04620 | Toll-like receptor signaling pathway |
scan04621 | NOD-like receptor signaling pathway |
scan04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:scan00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108962800
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108962800
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108962800
04621 NOD-like receptor signaling pathway
108962800
04622 RIG-I-like receptor signaling pathway
108962800
04623 Cytosolic DNA-sensing pathway
108962800
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108962800
05168 Herpes simplex virus 1 infection
108962800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:scan04052]
108962800
Cytokines and neuropeptides [BR:scan04052]
Cytokines
Interferons
108962800
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
228 aa
MAVPGCAQPRLWHSTLALLLLIVALATGLRCHHLRTHDPGNALQLLQDMAPRMTQFCHLQ
KPPVFPDTLLHNNLLPXXXXXXXSNGTRQHWPSQARNHLLNKLQHHIHHLEQCLADKATP
FKGPRNPLLAINKYFRDIHLFLHAHQHSACAWDHVRLEALVCFQHVDTLIRRMKHQAALD
PTEPTDSKHPSPASTSGHGLSGDGSSPGWDHFVPVTSLPSVEVMGKGV |
NT seq |
687 nt +upstreamnt +downstreamnt
atggctgtacctggatgcgcacagcctcgcctgtggcacagcaccctggcactgctgctc
ctcatcgtggctctggccaccggcctccggtgccaccacctgcggacacacgatcctggg
aacgcactccagcttctgcaggacatggctccacgcatgacacagttctgccacctccag
aagccaccagtcttccccgacaccctgctccacaacaacctcctgccnnnnnnnnnnnnn
nnnnnnnnctccaacggcacccgccagcactggcccagccaggctcgcaaccacctcctc
aacaagctgcagcaccacatccaccacctggagcaatgcctcgccgacaaggccacgccc
ttcaaaggaccacgcaacccgctgctcgccatcaacaagtacttcagggacatccacctc
ttcctccacgcccaccagcacagcgcctgcgcctgggaccacgtccgcctcgaagctctt
gtctgcttccaacacgtggacacactcatacggcgaatgaagcaccaagctgctctggac
cccactgaacccacggatagcaaacacccatccccagccagcaccagcggccacggattg
agtggtgatggcagcagcccaggctgggatcacttcgtaccagtcacatctcttccgagt
gttgaggtgatggggaaaggggtatga |