Scyliorhinus canicula (smaller spotted catshark): 119951941
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Entry
119951941 CDS
T11175
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04120
Ubiquitin mediated proteolysis
scau04210
Apoptosis
scau04217
Necroptosis
scau04510
Focal adhesion
scau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119951941
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119951941
04217 Necroptosis
119951941
09144 Cellular community - eukaryotes
04510 Focal adhesion
119951941
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119951941
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119951941
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119951941
03029 Mitochondrial biogenesis [BR:
scau03029
]
119951941
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119951941
Peptidases and inhibitors [BR:
scau01002
]
Peptidase inhibitors
Family I32: IAP family
119951941
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119951941
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119951941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119951941
NCBI-ProteinID:
XP_038631262
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All DBs
Position
17:35374128..35419430
Genome browser
AA seq
499 aa
AA seq
DB search
MDITTDCKQDLSNEIYRLATFIDFPRNVPLSEATLARAGFFYTGFKDQVKCFSCGGEVEN
WQHGDSAVSKHRLLFPACPFINGTHMNEQMVNSSFPLILHDRINSDQVASHHPSENGPCN
HLNCDRPYHNQSVSDPVRSRSVEDMSHLRPKNPAMCSEEARLKTFTTWPSYVIVTPRELA
KAGLYYINKDDQVQCFCCGGLMKNWEPGDRAMSEHKRHFPMCAFVSGHSVGNIPIDSNCS
RTDVNQPLNGVAEANFYPPKHPDKQTFDSRLQTFKCPEHFALDADNLARAGFYSTGNEDN
VKCFHCDGGLRNWESSDEAWEQHAKWFPGCAFLIQQKGHEFVNDVQLKKLCSSSTTEAFP
QEAPSAHLSESESTSMQSPVVQGALEMGFDNSLIMELVKKKLRLTHETYRSVETLVTDLL
SAERQTQDQEHKDVKEDVNLEEQLKKLKEEKCCKVCWDRDVCIAFVPCGHIATCKECSVV
QKCPICCSQIRERVRIYLS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatattacaacagattgtaaacaagacctctcaaatgaaatctatcgactggcaaca
tttattgactttccacgtaatgtcccactgtcagaagcaacattggccagagcaggtttc
ttttataccggtttcaaagaccaggttaaatgcttcagctgtggtggtgaagtagaaaac
tggcaacatggagactctgctgtaagcaagcacagactgctgttcccagcttgtccattt
attaacggtacacacatgaatgaacaaatggtcaactccagttttccgctcatacttcat
gaccgtataaactccgatcaagtagctagtcaccacccttccgagaatggcccgtgcaac
cacttgaattgcgatcgcccgtatcataatcaatctgtcagcgatcctgtgagaagtagg
agtgtcgaggacatgtcgcatctacgacccaagaatcctgcaatgtgcagcgaagaagcc
agactcaaaaccttcaccacctggcctagttacgtcattgtaacaccgagggaacttgct
aaagcagggctctattatatcaacaaagatgaccaagtacagtgcttttgttgtggtggg
ctaatgaaaaattgggaacctggtgatcgagcaatgtctgagcacaagagacattttcct
atgtgtgcttttgtttcaggacattctgttggaaacataccaattgattcaaattgcagc
agaacagatgttaaccagccattaaatggcgttgcagaagcaaacttttatccacccaaa
cacccagacaagcaaacatttgactccaggcttcagaccttcaaatgcccagaacacttt
gcacttgatgctgacaaccttgcaagagctggattttacagcacaggtaacgaagacaac
gtaaagtgttttcactgtgatggaggcctgagaaattgggaatctagtgatgaagcttgg
gagcagcatgcaaaatggtttccagggtgtgcgttcctcattcaacagaaaggccatgag
tttgtcaatgatgttcagttgaagaaattatgctccagttctactactgaagcattccct
caagaggctccttctgcacatctatcagaatctgaaagcacatctatgcaatccccagtt
gttcaaggtgctcttgaaatgggatttgacaactccctaataatggaactagtgaaaaag
aaactcagattgacacatgagacctacaggtctgttgaaacactggttacagatcttctg
tcagctgaaagacaaactcaggatcaggaacacaaggacgtgaaggaagacgtgaacctc
gaggagcagttgaaaaaactgaaggaagaaaagtgttgcaaagtttgctgggatcgagat
gtttgcattgccttcgtaccctgtggtcatatagctacgtgtaaagaatgttctgttgtg
cagaaatgtcctatatgctgttcacaaattcgtgagagagttagaatatacttatcttaa
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