Scyliorhinus canicula (smaller spotted catshark): 119952057
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Entry
119952057 CDS
T11175
Symbol
irg1l
Name
(RefSeq) immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
119952057 (irg1l)
Enzymes [BR:
scau01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
119952057 (irg1l)
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GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
119952057
NCBI-ProteinID:
XP_038631485
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All DBs
Position
17:57678369..57685298
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AA seq
431 aa
AA seq
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MILDNIGVGILGSTSHVFDICLSYCQQMFAHDPVSSVYGRKGIKLSPTLAAFANGVAAHS
MDFDDTWHPATHPSGAVLPALLAAAQMLPANSKPTGLDFLLAFNVGIEIQGRLMRFSKEA
NNIPKRFHPPSVVGTMGSAAAIAKLLSLNANQCINALAIAASLSGAPMANAATQAKPIHI
GNATRLGFEAAVLASKGMEGNVKILDKTLGCFGFSAFYGDYEPEKMAPLEQTHFLLEGQD
IAFKRFPAHLGMHWVVDAAVSVRQLATTNDSTFSPSMIDKIILRVPVSRYINRPFPETEH
EARHSFQFNACSALLDGDVNIESFSESKLQQDDLSQLLNKVELQHPEDNVASFENMYGEV
VLVLKNGDVLSGKCGTFYGHWRNPLSRESLLNKFKNNASYVLEQAKIEAIINTVENLEEV
RDCSTLISYLQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggataacattggagtggggatcctgggcagcaccagccacgttttcgatatc
tgcctcagttattgccagcaaatgtttgcacatgatccagtcagctcggtgtatggacgc
aaagggataaaactttctcccactctggcagcttttgccaatggagttgcggcccactca
atggatttcgatgatacctggcatcctgccactcacccttcgggagctgtactgcccgct
ctcctggctgctgcccagatgttgcctgcaaactctaaacccactgggcttgacttcctg
ctggcctttaatgtgggcattgaaatacaaggcaggttaatgcgtttctccaaagaggcg
aacaatatccccaagagatttcaccctcccagtgtggttgggacaatgggcagtgctgca
gccatagccaaattgctatcactgaatgctaaccaatgtattaatgccctggctattgca
gcttcactctcaggggcaccaatggccaatgcagcaactcaagcaaaacccatccatatt
ggcaatgccacacggctgggctttgaagcagctgtcctggcttctaaaggaatggagggg
aatgtgaaaattctagacaagaccttaggctgctttggattttctgctttctatggtgat
tatgaacctgagaagatggcaccacttgagcagacacattttctgcttgagggccaagat
attgcatttaagcgcttccctgcccatctgggcatgcattgggtagtggatgctgctgtc
tcagttaggcagttggcgactaccaatgatagtaccttttcaccctctatgattgacaaa
ataattctgcgggtccctgtttcccgatacatcaataggccattcccagagacagagcat
gaggctcgccattctttccagtttaatgcctgctctgcattgctggatggtgatgtgaac
attgaatcgttcagtgaaagtaaactccaacaagatgatctcagtcagttacttaacaaa
gtggagcttcaacatcctgaagataatgtggccagttttgagaatatgtatggagaagtg
gttctggtcctgaagaacggagatgtgctcagtgggaaatgtggcactttctatggacac
tggagaaacccgctatcgagagaatcgttgctcaacaaattcaaaaacaatgcttcatat
gtattggagcaggccaaaatagaagctattatcaacacagttgagaaccttgaagaagtg
agggattgttccactttaatttcttatttgcagtga
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